Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0138 ATGCCTCAGGATAATAGCTTATTAAACTCAATTTTTGCATCTTCTTCAAAGAAAATATTGAATTTGAAGAGCTCAGTTTTCAACAACAATGACGTGAATGATGAGATCAATGATCATGAATTGGCTCATAGGAAAGCAGAGGAAGCAGCGTTGAGGAGAAATGAAGCTGCCGAATGGCTTAGAGAAATGGATGAAGTGGCTTGTTTATCATTGCGTAAACAACCTTCCGAGGAAGAGTTTTGTCGCGCTCTTCGGAATGGGCTTATTCTTTGTAATGTTCTTAATAGAGTTAACCCTGGTGCTATTCTTAAGGTGGTGGATAATCATGTTCTTGAGCTTGATTCTTTGGAGGGACACGCACATTCTGCTATTCAGTATTTTGAAAACATGAAGAATTTTCTTGATGCTGTTCAGGATATGACTCTTTTGACCTTTGAAGCTTCTGATTTGGAAAAGGGTGGTTCATCAAGTAAAGTTGTGGACTGCATTCTGTGTTTGAAAGGGTATTACGAATGGAAGCTATCAGGTGGAGTTGGGGTTTGGAGATATGGAGGAACTGTCAGGATTACTTCTTTCCCCAAAGGAATTTCTTCTTCCAATTTGGGCAGTGAAAGTGCCGAAGACTCCTTTGACGAATCTCAATCCTCGCAGTATCAAGAATTACTTGAATTTCTTCAAATGTCTCCGGAGGTCTCCAATGAAGAAACCGAGACTGCAAGTGCTCTGGCTTTCCTGTTTGATCACTTTGGACTCAAACTTCTCCAGGCTTTCGTCAGAGAGACCGATGAGGCTGATGATCTTCCGTTTAATGCAATGGTAATTGACACATTTCTGAACAAGATAGTAAGGGATTTCTCTGCATTACTTGCTTCTCAAGGCACTCAGCTTGCATTTTTCCTCAAGAAAATATTGAAAGGGGATAATGGTTGTCTTTCTAAGAAAGAGTTCATGGAAGCCATCACATTATATCTTAATCAAAGAAGTAGTTTGGCATCGAATGATTTATCTAAATTCTGCACTTGTGGCGGAAAACGCGATAGTACTCAGCATAATGTCAATTATTCAGCCAAACATGCTGAAATAATTGATGCCCAGCAGAAACAACTTGAGGAAATGAAATGCCTCTTGGAGGAGATAAAGCAGGAGGTCAAACAGATTCAATATCAGTGGGACCAAGAACGAATCCGGCTCGAGAATCATATAGAGAGCCTTGAGGTGACGTCGTCTTCCTACCACAAAATTTTAGAGGAGAATCGCTCGCTTTACAATCAAGTGCAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGACCCTTCTTACCGGGGCAACAATCAAATGGACAATCTACAGTTGATTATATAGGAGAAGATGGAAACATAATGATTGTGAATCCCCTTAAGCAAGGAAAAGATGCGAGAAAGGTGTTTTCATTCAATAAGGTGTTCGCAACAAATGCCACACAAGAACAAATATATGTCGATACTCAGCCATTGGTTAGATCAGTTTTGGATGGCTATAATGCATGTATCTTTGCATATGGACAGACTGGCTCGGGGAAGACCTACACGATGAGTGGTCCGGATCTGATGACCGAAGACACATGGGGTGTAAACTATAGGGCTTTGCGCGACTTATTTCATATATCAAAGGAAAGAGCGGATGCAATCAAATATGAAGTTAGCGTCCAGATGATTGAAATATACAATGAACAAGTTAGAGATTTATTAGTCAGTGATGGTTCTAACAGAAGATTAGATATACGAAACAACTCTCAACTGAATGGTCTTAATGTGCCTGATGCAAGTTTGGTTCCGGTTAGTTGTACTCAAGATGTTCTTGATTTAATGAAAATTGGTCAGAAGAACCGTGCTGTCGGTGCTACTGCTCTAAACGAGCGAAGCAGTCGTTCTCATAGTGTGTTGACGATTCATGTAAGAGGAAGAGACTTAGTTTCTAATTCAGTTCTTAGGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGAGAAATCTGAGGCTGTTGGCGAGAGACTAAAGGAGGCACAACATATTAATAAATCTCTTTCTGCACTTGGCGATGTTATCTCGGCTTTGGCGCAGAAGAGCCAACACATTCCTTATAGAAATAGCAAGCTTACACAAGTTTTACAAGATTCATTAGGTGGCCATGCAAAGACTTTGATGTTTGTTCATATAAATCCTGAACTCAATGCCTTTGGGGAGACAATTAGCACATTGAAGTTTGCTGAGAGGGTTGCATCTATTGAACTTGGAGCTGCTAAATCTAATAAAGAAACCGGTGAAATCCGAGAGCTAAAGGAAGAGATATCAAATATCAAATTGGCATTGGAGAGGAAGGAAACTGAAATGGAGCAACTGAAATCTGGAAATGCACGGACTGCGACGGAATCTCAGAAATCAAGAGCTGTTTCACCTTTCCGTTTGCCCAAATATAATACCAGTGGCGGTTTGAAGCCTGAAATTAGTCAAAGATCCATTGATGATAGAAGCTCAGAGGCTAAAAACTATTCTTCGGGTAAGCAAAGAAGGTCAAGATTTACCTCATCATATATGGACAAGGACTCCATACCGAGAATGTCTCTTCTTTCTGAAGAAAAGTCGGTTAGCTCAGGGAAGCACAATAGATCACCATCACCTCCAATCAGAAGATCAATATCCACGGATAGAGGTTCTGTCACAAAAAGCAAGATCAAAATTGACAATGTAGAAAACCAACCAATTTTGAAGCATCTAATTCCAGCTAGAGTACCTGTAAACAAATCCCTTGTCACAATGACACCATCTACAGAACATAACTCAAATGTCTATCTGCACTCACAAGAGGCGGTGAAGCACGGCAACATTTCTGAACCTGTCTATAATCTTCAGAAAGTAAGCCTTAGGAAAGTTCATCAAGAACATGAAGAGGAACAGTTCAAACAACCATTTGCAGTAGTAAAACAAATTGGTGCTAGGAAAAGCAAAACTGAGAATAATAAGGTCAAGGCCAGACATCTTCAACAATCTCCCTTTAGGATTCGGAAGACTGATGAAATCGTAGAGCCGCCTCGAAAGCGTGATTACTCAGAGCCGGAAAATGATTTTAGCTTTATGGAGTCTACAATCAATAGTGCATCAAATGTTCAAAAGAAACGTCACGACATTACAAGGAATTCTCAGAACCTTGAATCAAGATGTATTATGCAAGGAGCTGAACCATTGTCTTCTAGTAAAGTTGAAAACAAACTTTTAAGTGGTCGCAATTCATCCATGCATGAACTTAAAAGAAGTCGATCGACGCCACGAGGAAAGTTTTTTGTATTATAA 3342 0.4016 MPQDNSLLNSIFASSSKKILNLKSSVFNNNDVNDEINDHELAHRKAEEAALRRNEAAEWLREMDEVACLSLRKQPSEEEFCRALRNGLILCNVLNRVNPGAILKVVDNHVLELDSLEGHAHSAIQYFENMKNFLDAVQDMTLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKGISSSNLGSESAEDSFDESQSSQYQELLEFLQMSPEVSNEETETASALAFLFDHFGLKLLQAFVRETDEADDLPFNAMVIDTFLNKIVRDFSALLASQGTQLAFFLKKILKGDNGCLSKKEFMEAITLYLNQRSSLASNDLSKFCTCGGKRDSTQHNVNYSAKHAEIIDAQQKQLEEMKCLLEEIKQEVKQIQYQWDQERIRLENHIESLEVTSSSYHKILEENRSLYNQVQDLKGAIRVYCRVRPFLPGQQSNGQSTVDYIGEDGNIMIVNPLKQGKDARKVFSFNKVFATNATQEQIYVDTQPLVRSVLDGYNACIFAYGQTGSGKTYTMSGPDLMTEDTWGVNYRALRDLFHISKERADAIKYEVSVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDASLVPVSCTQDVLDLMKIGQKNRAVGATALNERSSRSHSVLTIHVRGRDLVSNSVLRGCLHLVDLAGSERVEKSEAVGERLKEAQHINKSLSALGDVISALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAFGETISTLKFAERVASIELGAAKSNKETGEIRELKEEISNIKLALERKETEMEQLKSGNARTATESQKSRAVSPFRLPKYNTSGGLKPEISQRSIDDRSSEAKNYSSGKQRRSRFTSSYMDKDSIPRMSLLSEEKSVSSGKHNRSPSPPIRRSISTDRGSVTKSKIKIDNVENQPILKHLIPARVPVNKSLVTMTPSTEHNSNVYLHSQEAVKHGNISEPVYNLQKVSLRKVHQEHEEEQFKQPFAVVKQIGARKSKTENNKVKARHLQQSPFRIRKTDEIVEPPRKRDYSEPENDFSFMESTINSASNVQKKRHDITRNSQNLESRCIMQGAEPLSSSKVENKLLSGRNSSMHELKRSRSTPRGKFFVL* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0138 1113 Coils Coil 767 808 - -
Psa2g0138 1113 Coils Coil 362 389 - -
Psa2g0138 1113 MobiDBLite consensus disorder prediction 795 904 - -
Psa2g0138 1113 SMART kinesin_4 429 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0138 1113 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 30 1109 - -
Psa2g0138 1113 MobiDBLite consensus disorder prediction 1091 1113 - -
Psa2g0138 1113 MobiDBLite consensus disorder prediction 834 851 - -
Psa2g0138 1113 Coils Coil 29 49 - -
Psa2g0138 1113 Pfam Calponin homology (CH) domain 53 171 IPR001715 GO:0005515
Psa2g0138 1113 CDD KISc_C_terminal 429 762 - -
Psa2g0138 1113 Gene3D - 35 182 IPR036872 -
Psa2g0138 1113 MobiDBLite consensus disorder prediction 852 866 - -
Psa2g0138 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 797 IPR027417 -
Psa2g0138 1113 MobiDBLite consensus disorder prediction 874 904 - -
Psa2g0138 1113 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 1109 - -
Psa2g0138 1113 ProSiteProfiles Calponin homology (CH) domain profile. 50 171 IPR001715 GO:0005515
Psa2g0138 1113 Coils Coil 1050 1070 - -
Psa2g0138 1113 SMART ch_5 52 169 IPR001715 GO:0005515
Psa2g0138 1113 ProSiteProfiles Kinesin motor domain profile. 431 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0138 1113 SUPERFAMILY Calponin-homology domain, CH-domain 44 192 IPR036872 -
Psa2g0138 1113 MobiDBLite consensus disorder prediction 799 814 - -
Psa2g0138 1113 Pfam Kinesin motor domain 437 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0138 1113 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0138 1113 PRINTS Kinesin heavy chain signature 630 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0138 1113 PRINTS Kinesin heavy chain signature 661 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0138 1113 PRINTS Kinesin heavy chain signature 710 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa2g0138 1113 Gene3D Kinesin motor domain 373 762 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0138 Psa-Chr2 5179440 5184940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0138 422 777 Calmodulin-binding Proteins AT5G65930 42.975 2.64e-78 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0138 K10406 - gmx:100777378 1584.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0138 2 5179440 5184940 Psa2g0138 2 5179440 5184940 ECH
Psa5g3842 5 302776421 302785206 Psa2g0138 2 5179440 5184940 PCT