Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0105 ATGCACAGACTCTCCAATCGCTCTTCCTCCGTCTCCGCCCTACTCCGTTACGGCGGCGCACTTCGCCGTGACGCGGCTCTCCCACTTTCCACATCTTACTCTCATTTGGTGGGAGAGAATGACACAAAATCCAGATGGTATTCATTATTAGGTTCTGAGAAATCCGGCAGTGTTAATCAGCTAAACTTGAAAACAGATTTGTTTTTGGGAAAACGATATGAATCAACTGTTGCAGAATCTAGTGCATCAAGTTCCCCACCAGCTGAGAAATTTGAGTACCAAGCAGAGGTTAGTCGGCTCATGGACCTTATTGTTAACAGTTTATACAGTAACAAGGAAGTGTTTCTCAGGGAACTTATCAGCAATGCAAGTGATGCCTTGGATAAGCTGCGGTTTTTGAGTGTTACAGAGCCTGACCTGATGAAGGATGCAATTGATTTTGATATCCGAATTCAAGCTGATAAAGATAATGGGATCATCACTATCACTGATACAGGCATTGGCATGACTAAGCAGGAACTAGTTGACTGTCTTGGAACTATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAGGCTCTCAAGGATAGTAAGGGTGCTGGTGGTGACAACAACTTAATCGGTCAATTTGGTGTGGGATTTTATTCTGCTTTTCTAGTTGCTGACCGGGTGGTTGTCTCAACCAAGAGTCCAAGATCAGATAAACAATATATTTGGGAAGGAGAGGTAAATGCTAGCTCATATACCATATCTGAGGAGACAGACCAGGAGAAGCTGATTCCAAGAGGAACTCGCCTTACCCTGCATCTTAAGAGGGATGACAAAGGTTTTGCTCATCCAGAGCGAATTGAGAAGCTTGTGAAAAACTACTCCCAATTTGTCTCATTCCCAATATACACTTGGCAGGAAAAGGGATTCACCAAAGAAATAGAGGTTGATGAGGATCCAGCTGAGGCGAAAACAGACAACCAAGATGAGAAGACTGAGAAGAAGAAGAAAACTAAGACTGTTGTTGAGAAGTATTGGGACTGGGAGCTCACAAATGAGACACAACCTATCTGGCTTCGTAATCCTAAAGAAGTCACCAAAGAGGACTACAACGAGTTTTACAAGAAAACATTTAATGAATACCTGGAGCCGTTGGCATCATCACACTTTACCACAGAGGGCGAGGTAGAATTTAGGTCTATACTTTATGTTCCTCCCTATGCTCCATCAGGGAAGGATGACGTAATCAATCCCAAGACCAAGAATATAAGACTTTATGTGAAGAGAGTATTTATTTCAGATGACTTTGATGGAGAACTGTTCCCAAGATACTTGAGTTTTGTCAAAGGTGTGGTCGACTCAAATGACCTTCCGCTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCGTAGTGCGGATTATGAGGAAGCGATTGGTCAGAAAGGCTTTTGATATGATTTTGGGGATATCCATGAGTGATAACAGAGAGGACTATGAGAAGTTCTGGGATAACTTTGGCAAACACTTGAAATTGGGTTGCATTGAAGACCGAGAGAATCACAAACGCATTGCTCCGTTGCTTCGGTTTTTCTCATCTCAAAGTGAGGAAGAGTTTATCAGCTTGGATGAATATGTTGAGAACATGAAACCTGATCAAAAAGATATTTATTACATTGCTGCTGACAGTGTGAATAGTGCAAAGAACACACCTTTCTTGGAGAAACTTGCTGAGAAGGATCTTGAAGTGCTGTTTTTGGTGGATCCGATAGACGAGGTTGCCATCCAAAATATTAAATCATACAAGGAAAAGAATTTTGTTGATATTAGCAAGGAAGACTTGGATCTAGGTGACAAAAATGAGGAAAAGGAAAAAGAGATTAAGCAGGAATATAGTGGGACAATTGATTGGATTAAGAAACGTTTGGGAGATAAAGTTGCAAGTGTGCAGATTTCAAACCGATTGAGCTCTTCGCCTTGTGTTCTGGTGTCAGGAAAATTTGGTTGGTCTGCAAATATGGAAAGGCTAATGAAGTCACAAACAATGGGTGATGCCACTAGCTTGGAATTCATGAGAAGCAGAAGGGTGTTTGAGATCAACCCTGAACATCCTATTATCAAGAACTTGGATGCTGCTTGTAAAACTAATCCGGATGATCAAGAGGCCCTCAGAGCTATTGATCTTCTGTACGATGCAGCTTTGGTTTCCAGTGGGTTTACGCCTGATAATCCAGCACAGCTTGGAGGAAAGATATACGAGATGATGGGTATGGCTCTTAATGGTAAATGGTCATCTCCTCCAAGTCAGTTTGAGTCGACTCAAACTCAACCCCATGTTCTAGAAACTGTAGAAGCTGAAGTGGTCGAGCCTACTGAAGCTGGCAGTCAAAAGTGA 2379 0.4216 MHRLSNRSSSVSALLRYGGALRRDAALPLSTSYSHLVGENDTKSRWYSLLGSEKSGSVNQLNLKTDLFLGKRYESTVAESSASSSPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPDLMKDAIDFDIRIQADKDNGIITITDTGIGMTKQELVDCLGTIAQSGTAKFLKALKDSKGAGGDNNLIGQFGVGFYSAFLVADRVVVSTKSPRSDKQYIWEGEVNASSYTISEETDQEKLIPRGTRLTLHLKRDDKGFAHPERIEKLVKNYSQFVSFPIYTWQEKGFTKEIEVDEDPAEAKTDNQDEKTEKKKKTKTVVEKYWDWELTNETQPIWLRNPKEVTKEDYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILYVPPYAPSGKDDVINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRVVRIMRKRLVRKAFDMILGISMSDNREDYEKFWDNFGKHLKLGCIEDRENHKRIAPLLRFFSSQSEEEFISLDEYVENMKPDQKDIYYIAADSVNSAKNTPFLEKLAEKDLEVLFLVDPIDEVAIQNIKSYKEKNFVDISKEDLDLGDKNEEKEKEIKQEYSGTIDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKSQTMGDATSLEFMRSRRVFEINPEHPIIKNLDAACKTNPDDQEALRAIDLLYDAALVSSGFTPDNPAQLGGKIYEMMGMALNGKWSSPPSQFESTQTQPHVLETVEAEVVEPTEAGSQK* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0105 792 PIRSF HSP90_HTPG 60 791 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa2g0105 792 Gene3D - 347 519 - -
Psa2g0105 792 SUPERFAMILY Ribosomal protein S5 domain 2-like 349 607 IPR020568 -
Psa2g0105 792 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 29 789 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa2g0105 792 ProSitePatterns Heat shock hsp90 proteins family signature. 109 118 IPR019805 GO:0005524|GO:0006457|GO:0051082
Psa2g0105 792 CDD HATPase_Hsp90-like 98 293 - -
Psa2g0105 792 Pfam Hsp90 protein 276 763 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa2g0105 792 Hamap Chaperone protein HtpG [htpG]. 86 751 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa2g0105 792 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 89 303 IPR036890 -
Psa2g0105 792 SUPERFAMILY HSP90 C-terminal domain 630 750 IPR037196 -
Psa2g0105 792 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 111 271 IPR003594 -
Psa2g0105 792 Gene3D - 75 318 IPR036890 -
Psa2g0105 792 PRINTS 90kDa heat shock protein signature 89 109 IPR020575 -
Psa2g0105 792 PRINTS 90kDa heat shock protein signature 110 132 IPR020575 -
Psa2g0105 792 PRINTS 90kDa heat shock protein signature 159 176 IPR020575 -
Psa2g0105 792 PRINTS 90kDa heat shock protein signature 177 194 IPR020575 -
Psa2g0105 792 PRINTS 90kDa heat shock protein signature 206 228 IPR020575 -
Psa2g0105 792 PRINTS 90kDa heat shock protein signature 261 278 IPR020575 -
Psa2g0105 792 PRINTS 90kDa heat shock protein signature 279 297 IPR020575 -
Psa2g0105 792 Gene3D - 520 606 - -
Psa2g0105 792 MobiDBLite consensus disorder prediction 311 331 - -
Psa2g0105 792 Gene3D - 607 754 IPR037196 -
Psa2g0105 792 PANTHER BNAA05G29880D PROTEIN 29 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0105 Psa-Chr2 3631686 3637750 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0105 K09487 - gmx:100806710 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0105 2 3631686 3637750 Psa2g0105 2 3631686 3637750 ECH