Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0067 ATGAAGAAGCAACTAGCACCACTTGTTCTATTCTCTCTCACACTAATACTATCACTTATTCACTCCACCACCGCCGGTGCCGCCACCTCCGGCAGCCACAACATCACCCGCATTCTCGGCAAACACCCTGGATTCTCCACCTTCAACCACTACCTCACCATCACTCACCTCGCCGACGAAATCAACCGCCGCCAAACCATAACAATCCTCGCCATCGATAATGCCGCCATGTCGTCCCTTCTCGAGAAACACCTCTCCGTCACCACTCTCAAAAACGTCCTCTCCCTTCACGTCTTAGTCGACTACTTCGGCGCGAAGAAACTCCACCAAATCACGAACGGTACAACTCTAGTTTCGTCCATGTTTCAAGCAACCGGAGCCGCCGCGGGAACTGCCGGTTACGTCAACGTCACGAATCTCAAAGGCGGCAAAGTCGGTTTCGGCGCGGAAGACAACGACGGCCTACATTCTTTCTACGTGAAATCCGTTGAAGAACTTCCTTACGTCATCTCCGTACTTCAAATCAGTCAACCTCTAAGCTCCGCCGACGCCGAAGCACCGACGGCATCTCCGAGCGATATCGACTTAATCTCAATCATGTCAAAACAAGGTTGCAAAGCCTTCGCCGATTTGCTACGTGTTTCAAAAGCTCTTCCGACTTTCAAAGACACCGTTGACGGCGGTTTAACCGTTTTCTGCCCAACTGACAGCGCCGTTAACGGTTTCGCTGCTAAATACAAAAACCTAACCGACGCCAAGAAAGTTTCACTTCTTTTATATCACGGAGTTCCCGTTTACCAATCGTTACAGATGCTGAAATCTAACAACGGTATCATGAACACGCTAGCAACAGAAGGTGCTAACAAATATGATTTCACCGTCCAAAACGACGGTGAAGACGTGAACCTTGAAACCAAGGTTAACACCGCCAACATTATCGGAACACTGATCGATCAAGATCCGTTTGTGGTGTATAAGATCAACAAGGTTTTGATGCCGAGAGAGTTGTTTAAGGGAGTTAAAGAAGAATTAGCACCGGCAGAGTCACCGAAGGCGGCGAAGAAGAGCAAGAAGAAAGGTAAGGCGGCGGCGGATGAAGATGCGGATTCTCCAGCGGCGGATGGACCGGATGCGGATGCAGATTCCGATGATCAGAAAGCTGCTGACGATAGCGGAGTGAGTGGATTAAATCAAGGGTTCAGATTCATTATGGTAATTTTCAGTTTGATTATTGGAGCTTTGGTTTAA 1248 0.488 MKKQLAPLVLFSLTLILSLIHSTTAGAATSGSHNITRILGKHPGFSTFNHYLTITHLADEINRRQTITILAIDNAAMSSLLEKHLSVTTLKNVLSLHVLVDYFGAKKLHQITNGTTLVSSMFQATGAAAGTAGYVNVTNLKGGKVGFGAEDNDGLHSFYVKSVEELPYVISVLQISQPLSSADAEAPTASPSDIDLISIMSKQGCKAFADLLRVSKALPTFKDTVDGGLTVFCPTDSAVNGFAAKYKNLTDAKKVSLLLYHGVPVYQSLQMLKSNNGIMNTLATEGANKYDFTVQNDGEDVNLETKVNTANIIGTLIDQDPFVVYKINKVLMPRELFKGVKEELAPAESPKAAKKSKKKGKAAADEDADSPAADGPDADADSDDQKAADDSGVSGLNQGFRFIMVIFSLIIGALV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0067 415 SUPERFAMILY FAS1 domain 38 151 IPR036378 -
Psa2g0067 415 Pfam Fasciclin domain 44 116 IPR000782 -
Psa2g0067 415 Pfam Fasciclin domain 205 333 IPR000782 -
Psa2g0067 415 ProSiteProfiles FAS1/BIgH3 domain profile. 192 331 IPR000782 -
Psa2g0067 415 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12 407 IPR033254 -
Psa2g0067 415 MobiDBLite consensus disorder prediction 347 390 - -
Psa2g0067 415 MobiDBLite consensus disorder prediction 347 368 - -
Psa2g0067 415 Gene3D FAS1 domain 32 163 IPR036378 -
Psa2g0067 415 Gene3D FAS1 domain 197 333 IPR036378 -
Psa2g0067 415 ProSiteProfiles FAS1/BIgH3 domain profile. 32 198 IPR000782 -
Psa2g0067 415 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 12 407 - -
Psa2g0067 415 SUPERFAMILY FAS1 domain 189 334 IPR036378 -
Psa2g0067 415 SMART fasc_3 230 334 IPR000782 -
Psa2g0067 415 SMART fasc_3 68 182 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0067 Psa-Chr2 2061090 2063546 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0067 - - gmx:100805178 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0067 2 2061090 2063546 Psa2g0067 2 2061090 2063546 ECH