Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4945 ATGGAGAAAAAACTTGTCTGCAATGGTTGCAAACAAGAGCATTTAGTACCAACAAAAACAACTACATACCGTTGCTACCAATGCAAAGATGTTAGTAAATTGATTTCAGGTAATAAGCAATCAAGAGAAAACAGTTCAGGAGCCAGATTAGTCAACCAGAAGCAACTAGACCGTGCTAGCCGAATTGTATCAAGAGAAAACAGTTTAGGAGCCAAATTACTCAACCAGAAGAAACTAGATCACGCTAGCAGAATTGGTTCAGGTTATTCGTCGTCCTCGTTTTCCACAACTATAATCGGCAACAAACGTGCGGTTCTCTGTGGAGTTTCTTACAGCAGAAGAAGTCGATTTAGGCTCGAGGGAACCATTAATGATGTTGTTAACATGAAATCTCTACTGGTCGATAGTTTTTCATTCCCGATTCAATCCATACGCATCCTCACAGAAGAACAGAAGGATCCAAATTTCATTCCGACAAGGAAGAATATAATGGAATCGTTAAAATGGTTGGTGAAAGACTGCAAATTAGGAGACTCATTGGTGTTCTACTTCTCTGGACATGGTATGCAACAACCGGCACATGATAAAGAAGATGAAATTGATGGACTTGATGAAACTATTTGTCCTGTTGATTTTATTAGATCAGGAATGATTACTGATGATGAAATCAACTCTACCATTGTTGGACCTCTCAAGAATGGTGTTAAACTTCATGCTTTTATTGATGCTTGTCATAGTGGAACTACTCTTGATCTCATGTATGTTTATAAAAAAGACATCGGAAATTGGAAATGGTTGGATAACAGTCCGTATAACACGCAATCTGTTAATAAATCTACAGATGGTGGAATGGCCATTTGCATAAGTGCTTGTGAAGATTATCAGATAGCTGCTGATACTGCAGCTTTCGGAGGAAAACAGATGAATGGTGTTATGACCTATCTTTTAACAAAAATAATCAGAGAACATTCTGGAATTACATATGCCGGTTTGCTAGAAAAACTGCACGACGAAATTGGGAAGATTCACCAAAACAAACACTTTAACAGGATCTTGAAACGTATTTTTCGAAGTAAAATTGATCAGGACCCTCTTTTATCATCATCGGCGATATTTGACGTTAATACGAGAATATCACTTTGA 1143 0.3762 MEKKLVCNGCKQEHLVPTKTTTYRCYQCKDVSKLISGNKQSRENSSGARLVNQKQLDRASRIVSRENSLGAKLLNQKKLDHASRIGSGYSSSSFSTTIIGNKRAVLCGVSYSRRSRFRLEGTINDVVNMKSLLVDSFSFPIQSIRILTEEQKDPNFIPTRKNIMESLKWLVKDCKLGDSLVFYFSGHGMQQPAHDKEDEIDGLDETICPVDFIRSGMITDDEINSTIVGPLKNGVKLHAFIDACHSGTTLDLMYVYKKDIGNWKWLDNSPYNTQSVNKSTDGGMAICISACEDYQIAADTAAFGGKQMNGVMTYLLTKIIREHSGITYAGLLEKLHDEIGKIHQNKHFNRILKRIFRSKIDQDPLLSSSAIFDVNTRISL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4945 380 Gene3D - 42 380 - -
Psa1g4945 380 PANTHER METACASPASE-4 6 376 - -
Psa1g4945 380 SUPERFAMILY Caspase-like 109 347 IPR029030 -
Psa1g4945 380 Pfam Caspase domain 102 369 - -
Psa1g4945 380 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 6 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4945 Psa-Chr1 365274675 365276334 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4945 K22684 - gmx:100795758 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4945 1 365274675 365276334 Psa1g4945 1 365274675 365276334 ECH