Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4933 ATGGTTAAAGCTGCATTGGTAACCGGAGGAGGTGACCTGCTTTCTTATCCAAAAAATAGCAATGATGTTGTCATAGGTAAAGATTTGGTTGTTGTTGATGAGTCGAATGGAACGTCGGCACAAGACTCCGGGATAACAAGCGTCTTTTTCCCTACTGACAACAATGAATTTGATTTGGACAGTCCCGCAGAAGGTTTCGCTTCTATCCCTGAGGCCATTGAAGACATTCGCCAGGGAAAGATGGTAGTGGTTGTAGATGATGAAGATAGAGAAAATGAAGGAGACTTGATAATGGCGGCACAGTTGGCAACACCTGAAGCTATGGCTTTTATAGTAAAGCATGGAACTGGCATTGTTTGTGTAAGCATGAAAGAGGAAGATCTTGATAGATTGGAACTTCCTTTGATGGTGGACAGTAAGGCCAATGCCGAAAAACTTTGTACAGCATTCACTGTGACAGTGGATGCTAAACATGGTACAACCACAGGGGTGTCAGCTCATGATCGGGCAACTACTGTCTTGGCCCTTGCGTCTAGAGATTCAACTCCAGCTGATTTCAACCGCCCAGGCCATATTTTTCCACTAAAATACAGAGATGGCGGTGTCTTGAAGAGAGCTGGACATACAGAAGCTTCAGTTGATCTTACCGTACTTGCTGGTTTGGATCCGGTGTCAGTTTTGTGTGAGATTGTAGATGATGATGGTTCCATGGCTAGATTGCCTAAGCTTCGCCAATTTGCCAAGCGTGAGAATTTGAAAATTGTATCTATTGCCGACTTGATAAGATATAGAAGAAAGAGAGACAAATTAGTAGAATGCTCTTCTGCTGCAAGAATACCTACAATGTGGGGGCCATTCACATCATACTGTTATAAGTCTCTGTTAGACGGGATTGAGCATATTGCAATGGTTAAGGGTGACATTGGAGATGGACAAGATGTTCTTGTTAGGGTACACTCGGAGTGTCTAACTGGAGACATATTTGGATCTGCCAGATGTGACTGTGGAAATCAGCTTGCACTTGCAATGCAACAGATTGAGGCAGCCGGTAGAGGTGTACTTGTATATTTACGCGGACATGAAGGTAGGGGTAAACCTAACCCGGTGTTCGAGGCACGATATAACCTACAGGATGATGGGCGCGATACCGTAGAAGCCAATGAGGAGTTGGGATTGCCTGTTGACTCTAGGGAGTATGGCATTGGTGCGCAGATACTGAGGGATCTAGGTGTTCAATCTATGAAGTTGATGACTAACAATCCATCAAAATATATTGGTCTCAAAGGTTATGGTTTGACTGTTTCTGGTAGGATCCCATTGTTAACTCTTATCACTTCAGAGAACAAGAGATATTTGGAGACAAAACGTGTGAAAATGGGCCACATCTATGGCACGGAACATAACAGTGGCAATGTTAAAACCGATAGTGTTGAAGATTCAAATTCAAACGGAGTTACTAGCCTTTGA 1467 0.4349 MVKAALVTGGGDLLSYPKNSNDVVIGKDLVVVDESNGTSAQDSGITSVFFPTDNNEFDLDSPAEGFASIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEEDLDRLELPLMVDSKANAEKLCTAFTVTVDAKHGTTTGVSAHDRATTVLALASRDSTPADFNRPGHIFPLKYRDGGVLKRAGHTEASVDLTVLAGLDPVSVLCEIVDDDGSMARLPKLRQFAKRENLKIVSIADLIRYRRKRDKLVECSSAARIPTMWGPFTSYCYKSLLDGIEHIAMVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGKPNPVFEARYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVQSMKLMTNNPSKYIGLKGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHIYGTEHNSGNVKTDSVEDSNSNGVTSL* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4933 488 PIRSF RibA 64 473 - -
Psa1g4933 488 CDD GTP_cyclohydro2 270 462 IPR000926 GO:0003935|GO:0009231
Psa1g4933 488 Gene3D DHBP synthase 55 270 - -
Psa1g4933 488 Pfam GTP cyclohydrolase II 276 439 IPR032677 -
Psa1g4933 488 TIGRFAM ribA: GTP cyclohydrolase II 274 462 IPR000926 GO:0003935|GO:0009231
Psa1g4933 488 PANTHER GTP CYCLOHYDROLASE II-RELATED 2 481 - -
Psa1g4933 488 MobiDBLite consensus disorder prediction 466 488 - -
Psa1g4933 488 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 65 461 IPR016299 GO:0009231
Psa1g4933 488 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 64 268 IPR000422 GO:0008686|GO:0009231
Psa1g4933 488 Hamap GTP cyclohydrolase-2 [ribA]. 269 465 IPR000926 GO:0003935|GO:0009231
Psa1g4933 488 SUPERFAMILY RibA-like 269 440 IPR036144 -
Psa1g4933 488 Gene3D GTP cyclohydrolase II 271 442 IPR036144 -
Psa1g4933 488 PANTHER 3,4-DIHYDROXY-2-BUTANONE 4-PHOSPHATE SYNTHASE 2 481 - -
Psa1g4933 488 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 71 263 IPR000422 GO:0008686|GO:0009231
Psa1g4933 488 SUPERFAMILY YrdC/RibB 66 267 IPR017945 -
Psa1g4933 488 TIGRFAM ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 67 264 IPR000422 GO:0008686|GO:0009231
Psa1g4933 488 MobiDBLite consensus disorder prediction 467 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4933 Psa-Chr1 364881185 364884346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4933 K14652 - gmx:100782332 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4933 1 364881185 364884346 Psa1g4933 1 364881185 364884346 ECH