Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4881 ATGATCTCAATCTTTGCCCCTCTTATGATTGTGTTAACCATACTAACACATACCACATGCACATATGCTCAAAACTCACCACAAGACTACCTCAATGCTCACAACCGAGCACGTTCTGAAGTAGGCGTCGGTCCTATAACATGGGATGCAAACGTTGCATCTTTTGCAAAGAACTATGTGAACCAGCTTAAAGGAAGTTGCCAGTTAGTGCACTCTGGAGGCCAATACGGAGAAAATCTAGCTTGGGGCAGTCCTGACCTTACTGGAACAGCTGCTGTCGATATGTGGATCGATGAGATACAAAACTACGACTACGATTCTAACTCTTGTTTCAATGGTGAGTGCTTGCATTATACTCAAGTCGTTTGGCGCGATTCGGTTCGTCTTGGTTGTGCTAGGGTGAAGTGTAACAATGGCCGTGGCACTATTATTAGCTGTAACTATGATCCACCAGGCAACTTTATTGGTGAGAGACCTTATGAGAATAGTCCTTTTGAAATACCATTGAGCTTCAGCAAACATGATGACAAGTAA 534 0.4345 MISIFAPLMIVLTILTHTTCTYAQNSPQDYLNAHNRARSEVGVGPITWDANVASFAKNYVNQLKGSCQLVHSGGQYGENLAWGSPDLTGTAAVDMWIDEIQNYDYDSNSCFNGECLHYTQVVWRDSVRLGCARVKCNNGRGTIISCNYDPPGNFIGERPYENSPFEIPLSFSKHDDK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4881 177 PRINTS Allergen V5/Tpx-1 family signature 46 64 IPR001283 -
Psa1g4881 177 PRINTS Allergen V5/Tpx-1 family signature 92 105 IPR001283 -
Psa1g4881 177 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Psa1g4881 177 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Psa1g4881 177 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 17 160 IPR001283 -
Psa1g4881 177 Gene3D CAP 20 164 IPR035940 -
Psa1g4881 177 ProSitePatterns CRISP family signature 2. 143 154 IPR018244 GO:0005576
Psa1g4881 177 PANTHER PATHOGENESIS-RELATED PROTEIN 1 17 160 - -
Psa1g4881 177 SMART SCP_3 25 156 IPR014044 -
Psa1g4881 177 Pfam Cysteine-rich secretory protein family 31 148 IPR014044 -
Psa1g4881 177 CDD CAP_PR-1 27 160 - -
Psa1g4881 177 SUPERFAMILY PR-1-like 12 161 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4881 Psa-Chr1 363143435 363144502 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4881 K13449 - jre:109020655 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4881 1 363143435 363144502 Psa1g4881 1 363143435 363144502 ECH