Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4872 ATGGGTAGTAGCAGCAAGAAGAAAAGGAGCACCACTGTTTCCGAACAACACGAAGAAGAAGAAAACGCCATAGTTTCTCAAGAGCAACCTCTCACTAAGAAACCTAAAAACACCGAATCTTCCGCCACGCCATCTTCAATGGAAAGCAAGAAGAAACGAAAAGCTTTCCAAAAGGAGAGGCGTAGCGCCAAATCCAAATCCAAATCTGAACTCGCAGATTCGGACTCGAAACCTGCAACTGTGTTGACGGACTCGGCTAGCGGGAGCGGCGGTGATTCGTTACCGGAGTTTCATATTGGTGTGTTCAAGGACTTAGCGGCGGCGGCTGAATTGGTTAGGGAAGCTGCTGCTAAACAAATGGTGACGGAATTGAAGGAAGTTCAGAATGCTTATGGTGGAGTTCAGGGGAAGGAGAGTGGTGACGGTGGTTTTAAGCTGGAAGCTGAGAAGAATGATGGATTGGAGGAATGTGCACCTTCTGTTAGATATGCTGTTCGTAGGCTTATTCGAGGTGTTTCTTCTTCAAGAGAGTGTGCACGACAAGGTTTTGCTTTAGGTTTAACAGTCTTAGTTGGTGCTATCGACAAAATAAAGGTTGAGTCGTTCCTTAAACTCGTAGTAGATTTGTTGGAAGTAACTTCATCAATGAAGGGTCAGGAAGCAAAAGATTGTTTTCTGGGCCGTTTATTTGCTTATGGTGCTCTGGCTCGATCAGGAAGACTTATTGAAGAATGGAGCATGGATAAAAATACTCCATACATAAAAGAATTTGTCGGTATACTTATTGCCCTTGCCACTAAGAAGCGATACTTGCAAGAGCCTGCTGTCTCAATAATTCTATACTTGGTTGAAAAGTTGCCTGCTGAAGCATTAGCGAATCATATTAATGAAGCTCCTGGACTCGACAAGTGGTTTGAATCTGCTGCGGAAGTAGGAAATCCTGATGCTCTATTCCTTGCTTTAAAAGTTCGAGAGAAGATTTCTATTGACAGCTCCATTTATGGGAAACTACTACCAAACCCGTTCAGCTCTAGTCAGCTTTTCTCTGCTGATCACCTGTCCTTCCTGAGTAATTGTTTAAAGGAGGCAACCTTCTGTCAGCCCCGTGTTCATAGTATCTGGCCTGTTTTGATAAATATACTTATACCCAATACTGTTCCACAATTGGAAGACGCGGCGTCAGCTTCAAATTCATTAAAGAAACATAAGAAGAGTAGAAAATCTTGCTCTTCTGATGAGGAAATTGCGAAGAATCTCAAGTCTTTTTGTGAAATTATTATTGAAGGATCCCTTCTCTTCTCATCTCATGACCGTAAGCGCTTAGCTTTCGATGTCATGTTTCTTCTTCTGCAAAAGCTGTCTGCATCTTTAGTTCCAATTGTTCTGTCAAATAAAGTTGTTCAGTGCCTGATGGATATATTATCAACAAATAACACATGGCTGTATAAAGTTGGACAACATTTTCTTAAACAATTGTCAGATTGGGTGGGAGACGATGATGTCAAAAGAGTTGCTGTTATAGTGGCTATACAGAAGCACAGTAATGGAAAATTTGATTCTATCACAAGGACAAAGCATGTTAAAAATTTGATGTCACAGTTCAAAACAGAACCTGGATGCATGCTCTTTGTTCAAAACTTGATGAACCTGTTTGTGGATGAAGATTATGCTACGGAGGAACCCTCAGATCAAAGTCAAACAACAGATGAAAATTCTGAAATAGGCTCTATTGAGGATAAAGATTCTCCTAGGGCAAATGGGAATTCAGACTTTTTGAAAAGTTGGGTTATAGAATCCCTTCCTGGTATTTTAAAATTCTTAAAGCTGGACCATGAAGAGAAGTTCCGAGTGCAAAAAGAAATATTGAAATTTATGGCTGTTCAGGGTCTGTTCACGGCATCTCTTGGCACTGAAGTGACTTCTTTTGAGTTGGACGAGAAATTTAGGTGGCCAAAATCTCCCACATCAAATGCTCTTTGCAAGATGTGTATTGAACAGCTGCAGTTGTTGTTGGCAAATGCTCAGAAGGGAGATGGCTCACGAGCTTTGGCTAATAGTCTTGAGCCTAATGATCTGGGTTTGTACTTCATGAAGTTCTTCAGCACCTTATGCAATATTCCTTCAGTTTCTCTTTTCCGGTCTTTAGACGACGAGGATGAAAAAGCAGTGAAAGATCTGCAAGCAATGGAAGCTAAATTATCAAGAGAGGAAAAGAGCCACGACTGCAGTGTTGATGCAAATAGAGATCATGCACTGAGATACTTGCTTATCCAGTTGCTCTTACAAGTCCTTCTTTGTCCAAGGGAGTACTCAGAAGCTGCATCTGAACTCATCATCTGCTGTAAGAAAACATTTTCTACTTCTGATAACCCCGAGTCCTCTGGAGAAGATGATACAGAGGTTGATGATGCACCTGAATTGATGGATGTTCTTGTGGATACATTGCTCTCTCTGCTTCCACAGTCATCAGCTCCTATGCGGTCTGCTATTGATCAGGTGTTCAAATATTTTTGCAGTGATATCACTGATGATGGGCTGATGCAGATGTTGCGAGTCATAAAGAAAAACTTAAAGCCTGCAAGACATCCAGATGCAGCTAGTGCAGATGAAGATGACAATGATGAAGATGATGACTTATTCAATATTGAAGATGAAGAAATTGATCAAGCTGAGACTGGTGAAACAGGTGAGAGCGATGGGCAGTCTGATGACTCTGAATCCGTGGTCGAGGCAGAGGAAACTGGTCAGGACCATCCTGAAGCTTCTGATGATTCAGATAGTGGGATGGATGATGATGCAATGTTCAGGATGGATACATATCTTGCTCAAATTTTCAAAGAGAAGAAAAATCAGGCGGGAAATGAAACTGCTCAATCCCAGCTTTTGTTGTTCAAACTCCGCATCCTTTCATTATTGGAAATTTTCCTTCATGAAAATCCAGGTAAGCCTCAGGTTCTTACTGTGTACTCACATTTGGCGCGGGCCTTTGTTAACCCACACACTGCCGAAGTTAGTGAGCAGCTCAGTCAGCGTCTATGTGGAATATTGCAAAAGAAAATATTTAAAGCAAAGGATTATCCAAAGGGTGATGGGGTCCAATTATCCACACTTGAATCTCTGCTGGAGAGAAATTTGAAACTAGCATCAAAACCATTCAGAAAGCAGAAGTCTGCAACCAAGACCTCAAAGCAATCAGCTGAACAACAGAAAACAATTTCTTCCTTTCCCCAAACTTCGACTTTTTGGTTATTGAAAATTGTCGATTCAGGTAATTTTGCCGAGTCGGAACTGCAGGGGATTATTCAAATTTTCCAGAAAACATTGGTTGATTATTTTGACAGTAAGAAGTCTCAAATCAAAGCTGGATTTTTAAAAGAAATATTTCGAAGAAGACCGTGGATTGGCCATGCTGTATTTGGTTTTATTTTGGAGAGATGTGGAAGTGCCAAATCAGACTTTCGGCGAGTCAAAGCCCTTGATTTGGTAATGGAAATAATGAAGTCACTAGCAACCGAGAGTGGTGAGGGGCCAAATGCATCAAAAAAGATTGTTAAAAACAATTTGGATAAAGTCTCTCATGTTATGAAAGAGTTGGTGACAAATATGCCTAGCAAACCAGCAAGAAAGACAGAAGTAAACAGGTTTTGTGTTAAGGTCTTTGAGATCTTGTCTAAGCACAACCTCACTAAGTATCTTCTTAAAAGTTTGGCACCTGATACTCAAGCTTCCCTTGAGGCACAACTTGGTGACAAATTTGTTTGCTTGAAGAAGCTGGAAAAATGA 3783 0.4095 MGSSSKKKRSTTVSEQHEEEENAIVSQEQPLTKKPKNTESSATPSSMESKKKRKAFQKERRSAKSKSKSELADSDSKPATVLTDSASGSGGDSLPEFHIGVFKDLAAAAELVREAAAKQMVTELKEVQNAYGGVQGKESGDGGFKLEAEKNDGLEECAPSVRYAVRRLIRGVSSSRECARQGFALGLTVLVGAIDKIKVESFLKLVVDLLEVTSSMKGQEAKDCFLGRLFAYGALARSGRLIEEWSMDKNTPYIKEFVGILIALATKKRYLQEPAVSIILYLVEKLPAEALANHINEAPGLDKWFESAAEVGNPDALFLALKVREKISIDSSIYGKLLPNPFSSSQLFSADHLSFLSNCLKEATFCQPRVHSIWPVLINILIPNTVPQLEDAASASNSLKKHKKSRKSCSSDEEIAKNLKSFCEIIIEGSLLFSSHDRKRLAFDVMFLLLQKLSASLVPIVLSNKVVQCLMDILSTNNTWLYKVGQHFLKQLSDWVGDDDVKRVAVIVAIQKHSNGKFDSITRTKHVKNLMSQFKTEPGCMLFVQNLMNLFVDEDYATEEPSDQSQTTDENSEIGSIEDKDSPRANGNSDFLKSWVIESLPGILKFLKLDHEEKFRVQKEILKFMAVQGLFTASLGTEVTSFELDEKFRWPKSPTSNALCKMCIEQLQLLLANAQKGDGSRALANSLEPNDLGLYFMKFFSTLCNIPSVSLFRSLDDEDEKAVKDLQAMEAKLSREEKSHDCSVDANRDHALRYLLIQLLLQVLLCPREYSEAASELIICCKKTFSTSDNPESSGEDDTEVDDAPELMDVLVDTLLSLLPQSSAPMRSAIDQVFKYFCSDITDDGLMQMLRVIKKNLKPARHPDAASADEDDNDEDDDLFNIEDEEIDQAETGETGESDGQSDDSESVVEAEETGQDHPEASDDSDSGMDDDAMFRMDTYLAQIFKEKKNQAGNETAQSQLLLFKLRILSLLEIFLHENPGKPQVLTVYSHLARAFVNPHTAEVSEQLSQRLCGILQKKIFKAKDYPKGDGVQLSTLESLLERNLKLASKPFRKQKSATKTSKQSAEQQKTISSFPQTSTFWLLKIVDSGNFAESELQGIIQIFQKTLVDYFDSKKSQIKAGFLKEIFRRRPWIGHAVFGFILERCGSAKSDFRRVKALDLVMEIMKSLATESGEGPNASKKIVKNNLDKVSHVMKELVTNMPSKPARKTEVNRFCVKVFEILSKHNLTKYLLKSLAPDTQASLEAQLGDKFVCLKKLEK* 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4872 1260 MobiDBLite consensus disorder prediction 885 910 - -
Psa1g4872 1260 MobiDBLite consensus disorder prediction 74 90 - -
Psa1g4872 1260 MobiDBLite consensus disorder prediction 25 45 - -
Psa1g4872 1260 MobiDBLite consensus disorder prediction 1 90 - -
Psa1g4872 1260 MobiDBLite consensus disorder prediction 911 928 - -
Psa1g4872 1260 MobiDBLite consensus disorder prediction 885 928 - -
Psa1g4872 1260 MobiDBLite consensus disorder prediction 559 583 - -
Psa1g4872 1260 Pfam DNA polymerase phi 163 976 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Psa1g4872 1260 SUPERFAMILY ARM repeat 102 1017 IPR016024 -
Psa1g4872 1260 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 83 1257 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Psa1g4872 1260 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4872 Psa-Chr1 362647632 362655912 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4872 K02331 - gmx:100787296 1895.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4872 1 362647632 362655912 Psa1g4872 1 362647632 362655912 ECH