Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4860 ATGGCAGCCACTACCAGAGCGATTACCATAGCTAGCAGTTCAACCTACTCTCTTCTCACCACCAATAAGCCCTTTCTCGGTGGCCGCGCCCTTCGTCTCAACAACCTCAAGGTTTCTACTAGAGCTACTAGGTCTTATACTTGCAAGGCTATCTATTACCCTGAGGTTACTGTCAAAGAGGATGGCCAGCCACAAACCCTTGATTATAGAGTCTTCTTTCATGACAAATCTGGTAAAAAGGTTTCTCCATGGCATGATGTTCCACTGCAGCTAGGTGATGGTATCTTCAACTTCATTGTTGAAATACCAAAAGAATCCAGTGCAAAGATGGAGGTTGCCACCGACGAGCCTTTCACTCCCATAAAACAGGATATAAAAAAGGGGAAACTTCGATTTTACCCCTATAATATACATTGGAACTATGGCTTACTTCCACAAACATGGGAAGATCCAACTCTTGCTAACCATGAAGTTGAAGGAGCATTCGGAGATAATGATCCAGTTGATGTGGTTGAGATCGGTGAAAGCCAAAGGAAGATAGGAGAGGTTCTCAGGGTCAAACCCTTAGCTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTAGCAATTTCATTAGATGATCCAAAAGCATCACTTGTGAATGACGTTGATGATGTTGAGAAACATTTTCCAGGAACCCTCACTGCAATTAGGGATTGGTTCAGAGACTACAAGATACCTGACGGGAAGCCTGCTAATAGATTTGGTCTCGGCAACAAGGCAGTAAATAAGGATTATGCGCTGAAAATAATCACAGAGACGAACGAGTCTTGGAGTAAACTTGTGAAGAGATCAATTCCTGCTGGAGAGCTGTCACTTGTGTAA 876 0.4304 MAATTRAITIASSSTYSLLTTNKPFLGGRALRLNNLKVSTRATRSYTCKAIYYPEVTVKEDGQPQTLDYRVFFHDKSGKKVSPWHDVPLQLGDGIFNFIVEIPKESSAKMEVATDEPFTPIKQDIKKGKLRFYPYNIHWNYGLLPQTWEDPTLANHEVEGAFGDNDPVDVVEIGESQRKIGEVLRVKPLAALAMIDEGELDWKIVAISLDDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGNKAVNKDYALKIITETNESWSKLVKRSIPAGELSLV* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4860 291 CDD pyrophosphatase 94 273 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Psa1g4860 291 Pfam Inorganic pyrophosphatase 98 275 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Psa1g4860 291 Gene3D Inorganic pyrophosphatase 55 291 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Psa1g4860 291 ProSitePatterns Inorganic pyrophosphatase signature. 164 170 - -
Psa1g4860 291 PANTHER SOLUBLE INORGANIC PYROPHOSPHATASE 6, CHLOROPLASTIC-LIKE 28 291 - -
Psa1g4860 291 PANTHER INORGANIC PYROPHOSPHATASE 28 291 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Psa1g4860 291 SUPERFAMILY Inorganic pyrophosphatase 57 287 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4860 K01507 - gmx:100798544 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4860 1 362273992 362276116 Psa1g4860 1 362273992 362276116 ECH