Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4850 ATGAGTTCATTTTTTCTATTGTGTGTCTTGGCGTTATCCTTCATTGTGTCTAGTCATGTTGCACATGCACAAGACTCACCGGCCGATTACGTGAACGCCCACAACGCAGCAAGATCTGAGGTCGGTGTGTCAGATATTGTTTGGGACGACGCTGTCACTGCTTTCGCCCAAAGTTATGCTGATCAACGTAAGGATTGTGAACTGGTTCACTCCGGCGATAGCCGGTACGGGGAGAATATTGCTATGAGCACAGCTGACCTGAGTGGCACAGACGCAGTGAAGTTGTGGGTGGATGAAAAATCAAACTATGATTATAATAGTAACTCATGTGTTGGTGGTGAATGTCACCATTATACTCAGATCACGGAATAA 372 0.457 MSSFFLLCVLALSFIVSSHVAHAQDSPADYVNAHNAARSEVGVSDIVWDDAVTAFAQSYADQRKDCELVHSGDSRYGENIAMSTADLSGTDAVKLWVDEKSNYDYNSNSCVGGECHHYTQITE* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4850 123 SUPERFAMILY PR-1-like 1 121 IPR035940 -
Psa1g4850 123 Pfam Cysteine-rich secretory protein family 31 122 IPR014044 -
Psa1g4850 123 PRINTS Allergen V5/Tpx-1 family signature 46 64 IPR001283 -
Psa1g4850 123 PRINTS Allergen V5/Tpx-1 family signature 92 105 IPR001283 -
Psa1g4850 123 PRINTS Allergen V5/Tpx-1 family signature 115 123 IPR001283 -
Psa1g4850 123 Gene3D CAP 20 123 IPR035940 -
Psa1g4850 123 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 7 121 IPR001283 -
Psa1g4850 123 SMART SCP_3 25 123 IPR014044 -
Psa1g4850 123 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 7 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4850 Psa-Chr1 362061325 362062055 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4850 K13449 - gmx:100805116 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4850 1 362061325 362062055 Psa1g4850 1 362061325 362062055 ECH