Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4848 ATGAGGTCTTCATATCACATAAACTTAGCCATTTTCTTCATTTCCTCAACCTTTTGTTGCATAAATATTTCCCTAGCACAAAACACCCCTCAAGACTTTCTTCAAGTACACAACCAAGCTCGAGAAGAGGTTGGTGTTGGTCCACTCCATTGGAACCATACCCTTGAAGCCTATGCACAAAACTATGCAAACAAGAGAATGGATGATTGTGAACTTGAGCACTCTATGGGACCTTTTGGTGAGAATCTTGCTGAGGGTTATGGGGAAATGGATGGTTCTGATGCAGTGAAGTTTTGGATAACTGAAAAGCCTGATTATGACTACCACTCAAACTCCTGTGTTCATGATGAATGTTTGCATTATACTCAAATTGTTTGGCGTGATTCTGTTTATCTTGGTTGTGGTAAGTCCAAATGTAAGAATGGTTGGGTTTTTGTGATTTGTAGCTATTCACCACCTGGCAATGTTGATGGACAACGACCTTATTGA 489 0.4008 MRSSYHINLAIFFISSTFCCINISLAQNTPQDFLQVHNQAREEVGVGPLHWNHTLEAYAQNYANKRMDDCELEHSMGPFGENLAEGYGEMDGSDAVKFWITEKPDYDYHSNSCVHDECLHYTQIVWRDSVYLGCGKSKCKNGWVFVICSYSPPGNVDGQRPY* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4848 162 CDD CAP_PR-1 30 162 - -
Psa1g4848 162 ProSitePatterns CRISP family signature 2. 145 156 IPR018244 GO:0005576
Psa1g4848 162 PANTHER - 3 162 - -
Psa1g4848 162 SUPERFAMILY PR-1-like 27 162 IPR035940 -
Psa1g4848 162 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 3 162 IPR001283 -
Psa1g4848 162 SMART SCP_3 28 158 IPR014044 -
Psa1g4848 162 Pfam Cysteine-rich secretory protein family 34 150 IPR014044 -
Psa1g4848 162 Gene3D CAP 27 162 IPR035940 -
Psa1g4848 162 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Psa1g4848 162 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Psa1g4848 162 PRINTS Allergen V5/Tpx-1 family signature 118 134 IPR001283 -
Psa1g4848 162 PRINTS Allergen V5/Tpx-1 family signature 145 158 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4848 Psa-Chr1 361957033 361957910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4848 K13449 - gmx:100527778 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4848 1 361957033 361957910 Psa1g4848 1 361957033 361957910 ECH