Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4840 ATGAGTTCATTTTCTATATTGTGTGTCTTGGGATTAATATTCATTGTGGGGAGTCACGTTGCTTATGCACAAGACTCACCAGCAGATTACGTGAACGCCCACAACGCAGCAAGATCTCAGGTTGGTGTTTCAAACATTGTTTGGGACAACACTGTGGCTGCTTTTGCACAAAACTATGCTAATCAACGCAAGGATTGTCAACTGATCCACTCCGGTGGTGGTGGCCGTTACGGGGAGAATATTGCGATGAGCACCGGTGGCATGAGCGGCACAGATGCAGTGAAGTTGTGGGTTAATGAGAAATCCGACTATGATTATAACAGTAATACATGTGCTGCTGGTAAAGTGTGTGGTCATTATACTCAGGTTGAGTGGGTTAATGAGAAATCCGACTATGATTATAACAGTAATACATGTGCTGCTGGTAAAGTGTGTGGTCATTATACTCAGAAAAATCTACAGATAACTTGCGATTTTTCCTTAAAGTTTTTCTGCGGATTTTAA 504 0.4206 MSSFSILCVLGLIFIVGSHVAYAQDSPADYVNAHNAARSQVGVSNIVWDNTVAAFAQNYANQRKDCQLIHSGGGGRYGENIAMSTGGMSGTDAVKLWVNEKSDYDYNSNTCAAGKVCGHYTQVEWVNEKSDYDYNSNTCAAGKVCGHYTQKNLQITCDFSLKFFCGF* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4840 167 SUPERFAMILY PR-1-like 21 123 IPR035940 -
Psa1g4840 167 Gene3D CAP 25 125 IPR035940 -
Psa1g4840 167 PRINTS Allergen V5/Tpx-1 family signature 46 64 IPR001283 -
Psa1g4840 167 PRINTS Allergen V5/Tpx-1 family signature 93 106 IPR001283 -
Psa1g4840 167 PRINTS Allergen V5/Tpx-1 family signature 117 133 IPR001283 -
Psa1g4840 167 Pfam Cysteine-rich secretory protein family 31 125 IPR014044 -
Psa1g4840 167 PRINTS Venom allergen 5 signature 46 64 IPR002413 -
Psa1g4840 167 PRINTS Venom allergen 5 signature 91 106 IPR002413 -
Psa1g4840 167 PRINTS Venom allergen 5 signature 116 135 IPR002413 -
Psa1g4840 167 SUPERFAMILY PR-1-like 125 150 IPR035940 -
Psa1g4840 167 SMART SCP_3 25 146 IPR014044 -
Psa1g4840 167 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 125 151 IPR001283 -
Psa1g4840 167 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 7 126 IPR001283 -
Psa1g4840 167 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 7 126 - -
Psa1g4840 167 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 125 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4840 Psa-Chr1 361618270 361619292 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4840 K13449 - gmx:100805116 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4840 1 361618270 361619292 Psa1g4840 1 361618270 361619292 ECH