Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3703 ATGCACATTCCTCTTCTCACAATCCACCAAATCACCCACACATTGATTAACCTCATTCTCTCTATTCCTTTTCGCTTCTACTTTCCAATGACGCAATCGCTTTCTTCAATTCAAACCAGAATAAAAACTCAAAAACCATTTTCCCCTTTCTCCGAAACCATTTCCTTTCCCAATCCATCAATCGCACTCTCATCGGATTCCCCAAATTTCGTTCCGTTGTGGATTTCAATTATGGATAAACTAGGAGATGGGATTTTTCCAGATGAGGTGGTTATGCAGATTCTTGCTAGGTTACCAGTGAAATCGCTTTTTAGAAGCAAAAGTGTGTGCAAATTGTGGTATAGGTTGACTTTGGATAACTATTTCATTCAATTGTATAATGATGTTTCTAGGAAGAACCCTATGATTCTTGTTGAGATTTCAGATTCATTATTAGAATCCAAATCTAGCTTAATCTGTGTTGATAGTTTAAGGGGTGTATTTGAATTTTCGCTCAATTTCTTGAACGATAGAGTTAAGGTTCGAGCGTCGTGTAATGGGTTGTTGTGTTGTTCTAGTATTCCTGATATGGGTGTTTACTATGTCTGTAATCCGGTTACGCGGCAGTTTCGGTTGCTTCCGAAGAGTAGGGAAAGGCCGGTGACTCGGTTTTATCCTGATGGTGAAGCTACTTTGGTGGGGTTGGCATGTGACCCGGCGAATCAGAAGTTCAATGTTGTGCTTGCTGGTAGTCATCGTACTTTTGGTCATAGGCCGGATGGAAAATTCATATGTTTGGTGTTTGATTCGGAGTTGAACAAGTGGAGGAAGTTGATTTCTTTTCAAGATGAACATTTTACTCATATGAATAAGAATCAAGTTGTTTTTGTCAATAATGCTTTACACTGGTTGACCGCTAGCTCTAGTTATGTACTCGTGCTTGATTTAAGTTGTGATATTTGGAGGAAGATGTCGTTACCGTATGACCCGATTTGTGGAGCAGGAAATAGGACTTATTTATTGGAGTTAGATGGTAGGCTGTCGGTTATTCAAATTTCAGAAGCCTGGATGACTATATGGGTGCTGAAAGATTACTGGAACGATGAGTGGTGCATCGTGGATAAGGTGAGTCTGAGGTGTATCAAAGGAATGGTGCCAGGAATTTTCCCGATCAGTCAGACGAGCGAATATGTTTTCATGGCAACTCATAAGCAGGTTTTGGTGTATCATCGCAGGAGTCATGTTTGGAAAGAAATGTACGCAGTGAAATATAGCTCAACACTCCCGTTATGGTTTTCAGCACATGCGTATCGCAGCACAATGTTCTCTTGTAACTAA 1317 0.4032 MHIPLLTIHQITHTLINLILSIPFRFYFPMTQSLSSIQTRIKTQKPFSPFSETISFPNPSIALSSDSPNFVPLWISIMDKLGDGIFPDEVVMQILARLPVKSLFRSKSVCKLWYRLTLDNYFIQLYNDVSRKNPMILVEISDSLLESKSSLICVDSLRGVFEFSLNFLNDRVKVRASCNGLLCCSSIPDMGVYYVCNPVTRQFRLLPKSRERPVTRFYPDGEATLVGLACDPANQKFNVVLAGSHRTFGHRPDGKFICLVFDSELNKWRKLISFQDEHFTHMNKNQVVFVNNALHWLTASSSYVLVLDLSCDIWRKMSLPYDPICGAGNRTYLLELDGRLSVIQISEAWMTIWVLKDYWNDEWCIVDKVSLRCIKGMVPGIFPISQTSEYVFMATHKQVLVYHRRSHVWKEMYAVKYSSTLPLWFSAHAYRSTMFSCN* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3703 438 SMART fbox_2 86 126 IPR001810 GO:0005515
Psa1g3703 438 ProSiteProfiles F-box domain profile. 80 129 IPR001810 GO:0005515
Psa1g3703 438 SUPERFAMILY F-box domain 86 135 IPR036047 GO:0005515
Psa1g3703 438 TIGRFAM F_box_assoc_1: F-box protein interaction domain 177 402 IPR017451 -
Psa1g3703 438 Gene3D - 86 122 - -
Psa1g3703 438 Pfam F-box-like 87 120 IPR001810 GO:0005515
Psa1g3703 438 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 84 436 - -
Psa1g3703 438 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 84 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3703 Psa-Chr1 311313139 311314874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3703 - - gmx:100811223 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3703 1 311313139 311314874 Psa1g3703 1 311313139 311314874 ECH