Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3701 AGAACCACCGTTTTAGAAGCTTATGCTAGTTTCAGAACAAAATTTAAACAGGCATATCCGGTTGTTCTGACGTGGCTCGTGCACTTCGGAAACATAATCCTTCTATTATCGCTGTTTTGGTTGGACTGTGCCATTCGAGGTGTTGATTCATTTGTACGGATGGGTACAACATCCTTCTTCTCTGTTATATGGTGCAGCATATTCTCCGTGATTAGTATGATAGGGATGCTCAAGTTTCTGGTTGTCCTGGTATTGGCTACCTTGATTGGGTTTTTTGTCGGGTTCGTGCTTGCAATTTTGGTAGTTGCAATCTGTGGAGTTGTTATGCTGTGGTTTTATGGTAGCTTCTGGACAACAGTATTTTTCATCATCCTTGGAGGATTGGCATTTATGTTACGTCATGAACGTGTGGCACTTCTTATCACCACCATCTATTCTGTCTATTGTGCTTGGCTTTACGTTGGGTGGCTTCGTTTGTTCTTGGCTTTTAATTTAGCTTTCATCTCAAGTGATGTTCTGGTATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCGAATCCATTTGAGCAAAGAGCTGGAATGAACGGTCAACCAGGTTTTAGAAACGATGAATCAATGCCGGCTTCATCCTCTGAAAATGGACCATCTACAGATCGAAATGCTGGAGTCCCTTCAACTAGTGGGGTTGATTCCGATGTAACTTCTGAAGATGAAGTTGTTCGATTGTTGAACTGCTCTGATCACTATTCAGCACTGGGCTTCCTGCGCTATCAAAGTATAGATGTTTCAGTTCTGAAGCGTGAATATAGGAAGAAGGCAATGTTGGTACATCCTGATAAAAATATGGGTAATGAAAAGGCCGTAGAAGCCTTCAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCTTTGAAGAGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAGATTCTTAACGTGTTCAATAGATTTCATAATGCTCCACGTAGGAATAGTAGACCCGGGTTCTTTTCTTCTGGATTTTCGCATTCTGACGCAGATGGTGAGGACCCATTTGGTGAATCAAGGCGAATAGCTTGCAAAAGGTGTGGTGGCTTTCATCTCTGGATACACACTAAGAAACAAAAGTCTCGAGCAAGATGGTGCCAGGATTGTCAAGATTTTCACCAAGCCAAGGACGGTGATGGATGGGTTGAACAATCTTCCCAGCCATTTCTTTTTGGCTTAATGCAGAAGGTTGACTCTCCCTCTGCTTATGTGTGTGCGGATAGCAAAATATTTGATGCCACTGAATGGTACATCTGTCAGGGTATGAGATGTCCAGCAAATACTCATAAGCCAAGTTTTCATGTGAACACCAGTATAATGACTAAACATAATTCTGCGAAAGGAACTAGCTCTTCAACGCCAAAGGGTGGGCGGATGCCAACACCTCCTAATATGCCAACGCCTAATTTTGAAGAAACCATGACTGAGGAAGAATTCGTCGAGTGGTTACAGAATGCGGTACAGTCAGGCGTGTTTGACAATATGAACGGCGGCGGCACTGCAACGGAGAGCCCATCCTCCAAATCTGGAAATGGGATGAAAAATCCAGCTCCTGGCAATGGCGTCGGTAGCGGCAGCAAAAAAAAGAAAAAAGGAAAAAAGCAATGGTGA 1671 0.4261 RTTVLEAYASFRTKFKQAYPVVLTWLVHFGNIILLLSLFWLDCAIRGVDSFVRMGTTSFFSVIWCSIFSVISMIGMLKFLVVLVLATLIGFFVGFVLAILVVAICGVVMLWFYGSFWTTVFFIILGGLAFMLRHERVALLITTIYSVYCAWLYVGWLRLFLAFNLAFISSDVLVYFLKKNIDQQSRSNPFEQRAGMNGQPGFRNDESMPASSSENGPSTDRNAGVPSTSGVDSDVTSEDEVVRLLNCSDHYSALGFLRYQSIDVSVLKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEILMDSLKRKAYDDELRREEILNVFNRFHNAPRRNSRPGFFSSGFSHSDADGEDPFGESRRIACKRCGGFHLWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLMQKVDSPSAYVCADSKIFDATEWYICQGMRCPANTHKPSFHVNTSIMTKHNSAKGTSSSTPKGGRMPTPPNMPTPNFEETMTEEEFVEWLQNAVQSGVFDNMNGGGTATESPSSKSGNGMKNPAPGNGVGSGSKKKKKGKKQW* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3701 556 ProSiteProfiles dnaJ domain profile. 249 316 IPR001623 -
Psa1g3701 556 Pfam Cleavage inducing molecular chaperone 358 456 IPR032843 -
Psa1g3701 556 PANTHER OS03G0832900 PROTEIN 3 556 - -
Psa1g3701 556 PANTHER OS03G0832900 PROTEIN 3 556 - -
Psa1g3701 556 Pfam DnaJ domain 249 313 IPR001623 -
Psa1g3701 556 SUPERFAMILY Chaperone J-domain 244 327 IPR036869 -
Psa1g3701 556 MobiDBLite consensus disorder prediction 510 556 - -
Psa1g3701 556 MobiDBLite consensus disorder prediction 463 478 - -
Psa1g3701 556 MobiDBLite consensus disorder prediction 510 534 - -
Psa1g3701 556 MobiDBLite consensus disorder prediction 206 234 - -
Psa1g3701 556 MobiDBLite consensus disorder prediction 463 483 - -
Psa1g3701 556 PRINTS DnaJ domain signature 271 286 IPR001623 -
Psa1g3701 556 PRINTS DnaJ domain signature 288 308 IPR001623 -
Psa1g3701 556 Gene3D DnaJ domain 237 329 IPR036869 -
Psa1g3701 556 ProSitePatterns Nt-dnaJ domain signature. 293 312 IPR018253 -
Psa1g3701 556 CDD DnaJ 249 305 IPR001623 -
Psa1g3701 556 SMART dnaj_3 248 308 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3701 Psa-Chr1 311226234 311230883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3701 13 514 Miscellaneous Gene Families AT5G49580 62.772 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3701 K09534 - gmx:100789594 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3701 1 311226234 311230883 Psa1g3701 1 311226234 311230883 ECH