Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3667 ATGGGTCTTCATCATTTTAGAATTCTTATGATATTACTCTCATTCAAAATCACCATATCATATAAAATCCAAGCTTCATTTGTTTTTGGAGATTCTTTACTTGATGTTGGAAACAACAATTACATTACTTCACTTGCAAAAGCAAATCATTACCCTTATGGAATTGATTTTGGTAAACCAACAGGTCGTTTTTGCAATGGAAGAACCGTTGTGGATGTTATAGAACAAAAACTGGGTCTTGGCTTTACTCCACCTTACTTGTCTCCTAATACCTCTGGAATGGTGATTCTAAAAGGTGTTAATTATGCTTCTGCTGCAGCTGGAATTCTCAATTACACTGGTCATATTTTTGTTGGTCGAATCAACTTCGACGCACAAATTGATAACTTTGCGAATACAAGACAAGAAATCATAACAAAAATTGGTGTTTCAGCATCTCTCAAGTTACTCAATAATGCTCTCTTCACGGTAGCATTTGGCTCAAATGATTTCCTAGATAATTATTTGTCACCTCCACCTTCAATTCCAAATTTTCAGTTTTTGTCTCCAGAATCATTTGTAGCCATCATGATATCAACATTCAGAGTACAATTATCGAGGTTGTTCAATCTTGGAGCAAGAAAAATTGTTGTAGTAAATGTTGGGCCTATTGGATGTATACCATACATGAGAGATTCTAACCCATTTTCTAGAGATAAATGTGTCACATTCCCTAATCAACTAGCTCAATTATTTAACACTCAATTGAAAAGCCTTGTTGAAGAATTGAGAACAATTTTGAAAGGTTCATTATTTGTTTATGGAGATGCTTACCACATTATGGAAGATATCATCATGAATTACACTAAATATGGTTTCAAGAATCCAAATTCTGCATGTTGTCACCTAGTTGGTCGATTTGGAGGGTTGATTGCATGTGGTGGTTATTCAATAGTTTGTGAAGATAGACCAAAGTATATTTTTTGGGATACTTTCCATCCTAGTGATGCTGCCAATGTTATCATTGCAAAACGTTTATTAAATGGTGATGTTAATGATATTTCACCTACAAATGTTTGGCAACTATTGCAAGGTTGA 1077 0.3426 MGLHHFRILMILLSFKITISYKIQASFVFGDSLLDVGNNNYITSLAKANHYPYGIDFGKPTGRFCNGRTVVDVIEQKLGLGFTPPYLSPNTSGMVILKGVNYASAAAGILNYTGHIFVGRINFDAQIDNFANTRQEIITKIGVSASLKLLNNALFTVAFGSNDFLDNYLSPPPSIPNFQFLSPESFVAIMISTFRVQLSRLFNLGARKIVVVNVGPIGCIPYMRDSNPFSRDKCVTFPNQLAQLFNTQLKSLVEELRTILKGSLFVYGDAYHIMEDIIMNYTKYGFKNPNSACCHLVGRFGGLIACGGYSIVCEDRPKYIFWDTFHPSDAANVIIAKRLLNGDVNDISPTNVWQLLQG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3667 358 Gene3D SGNH hydrolase 16 342 IPR036514 -
Psa1g3667 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 5 357 - -
Psa1g3667 358 SUPERFAMILY SGNH hydrolase 150 341 - -
Psa1g3667 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 357 - -
Psa1g3667 358 CDD SGNH_plant_lipase_like 25 343 IPR035669 -
Psa1g3667 358 Pfam GDSL-like Lipase/Acylhydrolase 27 338 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3667 Psa-Chr1 309451254 309453410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3667 23 357 Acyl Lipid Metabolism Gene Families AT4G10950 37.758 2.12e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3667 - - mtr:MTR_2g033920 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3667 1 309451254 309453410 Psa1g3667 1 309451254 309453410 ECH