Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3597 ATGGACTCCGATTCATGGATCTCTTCCCGTCTCTCCAACTCTACACGCCGCTACTATTCTCGATCCGATCTGTTTCTCGGTGGAAACGACGACGCTGAACCCGGCGGCGATGATTTAAGAGCGGAATATCTTTGCCCTTTCTGCGCTGAAGATTACGACGTCGTTTCTCTCTGTTGCCACATTGACGAGGAACATCCTCTCCAAGCCAACACTGGGGTTTGTCCTGCTTGTGGGCAGAAGGTGGGAATGGATCTTGTTGGACATATTACAACGCAGCATTCGAAGTTTTTCAAAGTGCCGAGGAAAAGGAGGGTAGTGAGGAAAGGAGTTTCTAACTCAACATTATTTAGAAAAGAGTTAAGGGAAGGAGCATTGCATTCTCTTTTGGGAGGTTCTTCATCCAATTCCGAATCGGATACTCTGTTGTCATCGTTTATTTTTAACCCCGTTTTAGGTGATGAAGCTGTGAGTGAACAATCTAGTTCTTCCATTGAAGCTTCCCCAGTAAAAGATAGCTCAAAAGATGATTTTGTGGAAAGAAAACCAGAACAAGTACAGATGTCAGATGAGGACCGAATAGAGAAGACTCGAAGATTTAATTTTGTGCAAGGGCTTCTAATGTCCACCATTCTTGATGATAAATTATAA 648 0.4367 MDSDSWISSRLSNSTRRYYSRSDLFLGGNDDAEPGGDDLRAEYLCPFCAEDYDVVSLCCHIDEEHPLQANTGVCPACGQKVGMDLVGHITTQHSKFFKVPRKRRVVRKGVSNSTLFRKELREGALHSLLGGSSSNSESDTLLSSFIFNPVLGDEAVSEQSSSSIEASPVKDSSKDDFVERKPEQVQMSDEDRIEKTRRFNFVQGLLMSTILDDKL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3597 215 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 213 IPR033347 -
Psa1g3597 215 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 213 - -
Psa1g3597 215 MobiDBLite consensus disorder prediction 158 190 - -
Psa1g3597 215 MobiDBLite consensus disorder prediction 169 190 - -
Psa1g3597 215 Pfam Drought induced 19 protein (Di19), zinc-binding 42 94 IPR008598 -
Psa1g3597 215 Pfam Stress-induced protein Di19, C-terminal 115 210 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3597 Psa-Chr1 307323869 307326801 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3597 - - mtr:MTR_2g035070 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3597 1 307323869 307326801 Psa1g3597 1 307323869 307326801 ECH