Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3554 ATGGCGGCGGGGACAATGGCGACGGCGGCCGGAGCTGCGGTGATGCTGTACTACGTGAGTCGGAGGTTGACGAAGAAGGAGGAAGAGGAAGAAGATGATCACGACGGCGATGTGTCGAAATCGAGTAGATCGATTCGACGGAGAAGGATTTCCCGGAGACCAGCTCAGGCACCGGCGACTCTGCTTGAATCCATTGTTACTTTGTCTGAGACTTTGCGGTTTACGTATGCGGAGACACTTGGGAAATGGCCGATTGGGGATTTAGCTTTTGGGATCAATTACTTCATGCGTAAACAGGGTAATTTGGCAGTTGCTAGTGTGTATGCTGGAAGCGATTGTGTGCAACTGAAAGGAGATGAAATTATTGTCGAATTGTATGAGCTTTTGAGGCTATTGACATTGGGTATGCTTTTTTCGAAGAAGCCGTTTCCTGTGTTTTTAGATTCAGCTGGATTTTCGGTGGAAGATGTTCTCATGCAGAAGCCTAAAGCTGGGCTTCTGAAACCTGCTTTCACAATTATACGCGATACACAGTCAAAATGTTTACTTCTATTGATCCGGGGCACTCATAGCATAAAAGATACACTGACAGCTGCAACTGGCGCTGTCGTGCCCTTCCATCATTCGGTTTTAAATGATGGTGGAATAAGCAACTTGGTTTTAGGATATGCGCACTGTGGTATGGTTGCTGCTGCTCGGTGGATTGCAAAGCTCTGTACTCCTACCCTACTTAAGGCTCTTGCTGAATGTCCAGACTTCAATGTCAAGATTGTTGGGCACTCACTTGGCGGTGGTACTGCTGCGCTATTAACATATATTCTTAGAGAGCAGAAAGAGTTCTCGTCAAGTACTTGTGTCACATTTGCCCCAGCTGCGTGTATGACATGGGAGTTAGCAGAATCAGGAAAGCACTTTATTACTACCATCATAAATGGTTCTGACTTAGTGCCAACATTTTCAACTTCATCTATTGATGATCTCCGATCTGAGGTCACCGCATCCTCTTGGTTGAATGATTTACGGGATCAGGTTGAACATACAAAGGTCCTGAATGTTGTCTACCGCTCTGCAACGGCACTTGGATCTCGCCTACCGACTATATCTAGCGCAAAAGCTAGGGTAGCTGGTGCAGGTGCTATTCTGTGGCCAGTAACCAGTGGCACTCAGGTTATGATGAAGCGTGCACAAAGTGTTGCAGAAGCTGTTGTCAGAACTCGATCGTCGCTGTCATCATGGTCTTGCATGACTGCCCGCCGACGAAATGTCGCTCCATTGGCAAACTCAGATACAGAAGACTTAACTACTGAAGTTTCTCTATTATCTGAGAGAATATCTGGATCTCTTTTGACTGAAAAGGTAGCAACAGAGTCTGTGCTTACTGAAGAACACAATTCCTCAGTCACAGGATCAGGCCATGATGACACAGATGAAGAGGAACATCTCATTCCTGCTAACCAAGACATCACCACATCCTCCGTAGATGACATAACAGAAGGCCAGTTATGGTACGAACTGGAAAAGGAGCTTCAAAAACAGGACGACACCATAGACATTCATGCTCAGGAAGAAGAGGCTGCAGCAGCAAAAGAGATCACTGAAGAAGAAAATCAGCTTGTCGATGCTGCAGAATGCAGTAATTCAATCACAACATCCGATAACTTAGATAACCATCGGTTTTATCCACCAGGCAGAATCATGCACATTGTATCTATGCCTTCATCCGATACTTCAGATTCAAATTCCGATGATCATCCTATAGAAGAACATGTCCGCTTATATGAAACACCGAGAGAGCTGTACAGCAAGCTCAGACTGTCGAAAACGATGATAAATGACCATTACATGCCAATGTATAAAAAGATGATGGAATTATTAATCCGAGAATTAGAGAAAGATAGCAGTTCTAATAGTTTAATGTGA 1920 0.4479 MAAGTMATAAGAAVMLYYVSRRLTKKEEEEEDDHDGDVSKSSRSIRRRRISRRPAQAPATLLESIVTLSETLRFTYAETLGKWPIGDLAFGINYFMRKQGNLAVASVYAGSDCVQLKGDEIIVELYELLRLLTLGMLFSKKPFPVFLDSAGFSVEDVLMQKPKAGLLKPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALAECPDFNVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPTISSAKARVAGAGAILWPVTSGTQVMMKRAQSVAEAVVRTRSSLSSWSCMTARRRNVAPLANSDTEDLTTEVSLLSERISGSLLTEKVATESVLTEEHNSSVTGSGHDDTDEEEHLIPANQDITTSSVDDITEGQLWYELEKELQKQDDTIDIHAQEEEAAAAKEITEEENQLVDAAECSNSITTSDNLDNHRFYPPGRIMHIVSMPSSDTSDSNSDDHPIEEHVRLYETPRELYSKLRLSKTMINDHYMPMYKKMMELLIRELEKDSSSNSLM* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3554 639 SUPERFAMILY alpha/beta-Hydrolases 163 322 IPR029058 -
Psa1g3554 639 Pfam Lipase (class 3) 184 320 IPR002921 GO:0006629
Psa1g3554 639 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 633 - -
Psa1g3554 639 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 633 - -
Psa1g3554 639 Pfam Lipase 3 N-terminal region 49 123 IPR005592 GO:0016042
Psa1g3554 639 CDD Lipase_3 175 326 - -
Psa1g3554 639 Gene3D alpha/beta hydrolase 153 357 IPR029058 -
Psa1g3554 639 MobiDBLite consensus disorder prediction 455 477 - -
Psa1g3554 639 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3554 Psa-Chr1 305633522 305637744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3554 1 636 Acyl Lipid Metabolism Gene Families AT4G16070 64.402 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3554 - - gmx:100812454 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3554 1 305633522 305637744 Psa1g3554 1 305633522 305637744 ECH