Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3544 ATGAAGTTTCCACTCATTCTCATTTCACTCTATGCTCTCTCTTTCTTCCAAATATCTTATTCCACAGATAGATCACAATTGCCTATGATTGCTTTTAGTTGGTGGGATGATATAGGTACATTTAAGGCTGGTGAAACTGCAACCATTAAGGTTAAAGTACTTGAGAACGGTGATAAAATCGATACTAATATTTTCCATCCCATAGTTTCTGTCAATGGAAAGGAAGGAAATAGTTCCTATATATCCACCGTGTTATCGGATTTCGAAGGAGACTTTGATAATTGGAAGATTTCCTTCACTCCTATTAGGGTTGGATTGTTCAATGTCCTCATTGATGAAGATCGTTACAAAGTTTCTGACTCGTCGTTGCATTTCCAAGTTGAACCAGGGAACATGTATCCATCTGTGTGTTTGGCATCATGGAAAGGGATGAAATATGAGTTTGAAGCTGGTTCAAAAGCTACAATCATGGTGCTACTTAAAGATGCATTCGGGAATGGAATTTCAAAGACAACTCAAGTTTCCTATATGCCTGATTTTAAGTTGTTTGTGTTAAGTAAAAATGGTTCTTTTGCAAATGAACTTGATATCTCCAACATGGGATGGAATGAGTTTGATTATATAGTCATCGAGTTCGTAGTGACCAAAGCTGGAAACTTCTCTTTGCGCGTCGAAGGAGGAAACCAAACCTTGAACGGTTCTCCCTTACCGTTGAAAGTGAATCCAGGAGTTATAGATGTTTCTAAATGTGTTGCTAACTGGAAAATTGAACATCATGCATGGCAATTGTCTTCAAAGATGGAGATCTTTATACATCAGTTGGATCAATATGGAAATCTGGTTTCCGGACTGTATCCGTTTGATGTTGAAGTCGTTGAAAGAGACACGAATTTGTCGATACCGATAGCAGATCTTCATTTCGAGGAAGTGGAAGCTGGAGTTCAGTTGTTTTCCTTTGGTAATTGGGAACCAGGGAACTTCCTGCTAACAATATATGATGCCAAACATAACAAAAGCATTTCCAATATGCCATATGTGTATACTGTTTTTGTCGGTTATTGTGATGGCGTAAAAAGTGTCGTCAATGGATCTGGTTTAAATGACTCAGTTGCTGGGATAAGATCAGAATTCTCTGTTTATTTGAATGACATGTATCAATATCCTTCTCCTGTTGAAGAAGGGATACTTCAAGTACAAATCTTGAAAATTAACGACTCATACAGTGTTTCGCCAATTATATATCCCATGATAAACAATAATGGGAGTGGAATGGACTCAGGAGTGACATATGATGGTATCGGCCACACGGAAACCACCCTGTCGCCTTCACCTTCCATTGATATAGGCAACAATTTGAGGAACACAAACATAATTAGCAGCGCATTTCAAGTCGAATACACATCAGAGAAAAGTGGCTTTTATGACATTAATGTATATTGTGGTAACATAATATTGAATGAGGGTCATTCATTCAGAAAAGAGGTAAAAGCAGGTGAAGTAAATATCTCCTTGTCAAGTGTGGTAAGGTTTTCTTCAAAGGTACCAAAACTGTCAAAGAATGAGATAGTTGTAGAGGTTTTGGATTCATATTTAAACCCTGTCCTCTCGCAAGAATCGCGGTTGAAATTGGAGATTACTTCAACTAATCGTTCCGGATTTTCAACATGGGACACCATTAATAACGAGGATGGATCATACACTTGCAGCTATATGGTTAAAGATGTTGGCACTTATGAGATTTGTGCTTCTTTTGATGGAATGCATTTCTTGCCATGTCCCCTCAGTATCAATGTGTATAGTAATGAATATTTTCCTAAGGCCAATGATGATACATTATCGATTTGGGAAGATGAATCCATTGCCTTTGATGCCTTGGAAAATGATTATTTTGCTGGTGATAATGCAAGTATAGTCGAATTCTCAAAATCAGATCATGGTTCACTTATACAGAATGGAAGGATCTTTCGCTACACACCCTATGAAGATTACTATGGAAATGATTCGTTTCGGTATACAATATCAGATATAAATGGAAATCTTGCTACGGCTTATGTGTACATTTCTGTTCTCAATATTCCACCTCAGTTTGCTTCGGCTCCAAGTCAACTGCAAGCAACAGAAGATTTAATAAGTCCTAGATTCGGTGGTTTTTCTGGGTTTGAGATAACGTATTCAAATCTATTGGAGAATATATCTGTCAATCTAAGAGCACAATCTGGAAGTATATTTCTGTCTCCGGTGTTGATGCAATTTGGAGAACCAATGTGGAGCGAACTTACGATTAATGCAGGTAACGAAACCACAAACAGTTTAATACTAGAAGGCTCGGTGGAAGTTATTAACATCGCGCTTCAGTCACTTCAGTACCTCGGAAATGAGAATTTTTACGGTGCAGATACCATTCAAGTCTCCGCGAAGAACATGAACGGAGTAAATTCTTTGAGTGTTCCGATTTTCGTTGATCCTATCAACGATCCTCCATATATAAGAGTCCCTTACTTCATCATATTGCGGAGTGATGAAAATGAAAGACTTATCTTTGACAAAGATAAAGACAGGTTTGAGTTTTACATTGGAGATCCCGATCTTCTTACGTTCCCTGCTGGCGAGGCTCATTTCCTGATGTCATTTTCTATGGAAGTAAGCGACGGATTATTAGCTACAAATCTTCCATTCCATTTGATCAACACAACTGAAGTGAAGCACAGAAATAACTATCAGTGGCAGTCTCTTCAAACATATGTAACCATCTCAAAGCACTTTATGGTCAAAGCCAGTGGAATCAGATTTCAAGGCACAGTAAATGACTGCAATACTGTTATGCAGGAACTCTATTATCATGGAGATGAAAATGGAGCAACATTAACATTGACATTGAATGACATGGGAAACTATGGGTGTTATCCTGATTGTGAAGAAGGAATGACAATGCCATTATATACTGAGGCTATGGTTAACTTAATGAGAAAGCAACCAATGGATTCATTTCTTGCTCACACATTAGGATCGATTATCGTCATTGAATTCGTTATCATTACCTCTCTTGGATTGTTGCTTCTATACTTCACCTGCAAATGTGCAATTCTTCTTGTGCATGAAAGAAGAAAGAATGAGAAAAGGTCTTCAGAGCCATCTACAGATCAAACTTCCCAAACACAAACTTCAAGCATCAACATACCTGAGAATGCTACTAATTTCACTGGCTGCTGTTGGAGTTCTTCCTTGCTTCGTTTTCGTACGCAATCCTCAAGTTTTCGCCATCGGTTCCGTCCTCCATTTGAAGTTGGAGAACCTAGCAAGAAGACAGTGAATCCATCCTCTCCTTCGACTAGTGAAACACTTCATACAGTTATTTCCAACCTCGGCCACTCTTGA 3375 0.3837 MKFPLILISLYALSFFQISYSTDRSQLPMIAFSWWDDIGTFKAGETATIKVKVLENGDKIDTNIFHPIVSVNGKEGNSSYISTVLSDFEGDFDNWKISFTPIRVGLFNVLIDEDRYKVSDSSLHFQVEPGNMYPSVCLASWKGMKYEFEAGSKATIMVLLKDAFGNGISKTTQVSYMPDFKLFVLSKNGSFANELDISNMGWNEFDYIVIEFVVTKAGNFSLRVEGGNQTLNGSPLPLKVNPGVIDVSKCVANWKIEHHAWQLSSKMEIFIHQLDQYGNLVSGLYPFDVEVVERDTNLSIPIADLHFEEVEAGVQLFSFGNWEPGNFLLTIYDAKHNKSISNMPYVYTVFVGYCDGVKSVVNGSGLNDSVAGIRSEFSVYLNDMYQYPSPVEEGILQVQILKINDSYSVSPIIYPMINNNGSGMDSGVTYDGIGHTETTLSPSPSIDIGNNLRNTNIISSAFQVEYTSEKSGFYDINVYCGNIILNEGHSFRKEVKAGEVNISLSSVVRFSSKVPKLSKNEIVVEVLDSYLNPVLSQESRLKLEITSTNRSGFSTWDTINNEDGSYTCSYMVKDVGTYEICASFDGMHFLPCPLSINVYSNEYFPKANDDTLSIWEDESIAFDALENDYFAGDNASIVEFSKSDHGSLIQNGRIFRYTPYEDYYGNDSFRYTISDINGNLATAYVYISVLNIPPQFASAPSQLQATEDLISPRFGGFSGFEITYSNLLENISVNLRAQSGSIFLSPVLMQFGEPMWSELTINAGNETTNSLILEGSVEVINIALQSLQYLGNENFYGADTIQVSAKNMNGVNSLSVPIFVDPINDPPYIRVPYFIILRSDENERLIFDKDKDRFEFYIGDPDLLTFPAGEAHFLMSFSMEVSDGLLATNLPFHLINTTEVKHRNNYQWQSLQTYVTISKHFMVKASGIRFQGTVNDCNTVMQELYYHGDENGATLTLTLNDMGNYGCYPDCEEGMTMPLYTEAMVNLMRKQPMDSFLAHTLGSIIVIEFVIITSLGLLLLYFTCKCAILLVHERRKNEKRSSEPSTDQTSQTQTSSINIPENATNFTGCCWSSSLLRFRTQSSSFRHRFRPPFEVGEPSKKTVNPSSPSTSETLHTVISNLGHS* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3544 1124 PANTHER JITTERBUG, ISOFORM N 19 131 IPR044801 GO:0030036|GO:0051015
Psa1g3544 1124 PANTHER JITTERBUG, ISOFORM N 190 991 IPR044801 GO:0030036|GO:0051015
Psa1g3544 1124 Pfam Bacterial Ig domain 595 678 - -
Psa1g3544 1124 Gene3D Immunoglobulins 517 603 IPR013783 -
Psa1g3544 1124 SUPERFAMILY E set domains 520 600 IPR014756 -
Psa1g3544 1124 MobiDBLite consensus disorder prediction 1037 1058 - -
Psa1g3544 1124 Gene3D Immunoglobulins 323 505 IPR013783 -
Psa1g3544 1124 SUPERFAMILY E set domains 133 251 IPR014756 -
Psa1g3544 1124 MobiDBLite consensus disorder prediction 1044 1058 - -
Psa1g3544 1124 Pfam Filamin/ABP280 repeat 353 482 IPR017868 -
Psa1g3544 1124 Pfam Filamin/ABP280 repeat 519 594 IPR017868 -
Psa1g3544 1124 Gene3D - 604 686 - -
Psa1g3544 1124 PANTHER JITTERBUG, ISOFORM N 190 991 - -
Psa1g3544 1124 PANTHER JITTERBUG, ISOFORM N 19 131 - -
Psa1g3544 1124 MobiDBLite consensus disorder prediction 1096 1124 - -
Psa1g3544 1124 MobiDBLite consensus disorder prediction 1100 1124 - -
Psa1g3544 1124 Gene3D Immunoglobulins 131 241 IPR013783 -
Psa1g3544 1124 ProSiteProfiles Filamin/ABP280 repeat profile. 502 598 IPR017868 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3544 - - ccaj:109808168 1772.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3544 1 305386776 305391513 Psa1g3544 1 305386776 305391513 ECH