Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3539 ATGGTGGGTTTGAGTGTAGTATTAGAATCTCAAAAAGGTGGTATAATAAGCAAGAACAACAAGAAAACTCCCCAAGTTATTAACAAAGCAATGATGCTTAATAGCTTCCATAAACAATCTCCTTTTCATCATGAATCTCATTTTCAGGAACAACAACATACAACGTTTCTGAAACTATGTTTTCTCTGCACGAAAAGGTTGTTACCAGGAAAAGACATCTACATGTACAAAGGCGATAGAGCTTTCTGTAGCGTGGAATGTAGATGCAAGCAGATTTTCATGGATGAGGAAGAAAGTAACAATATTCAGAGTGAGAACTATTATTTTGCTGCAATCTCTTCATCTTCATCTTCATCTTCTTCATCTTCAGAAGCTTCTTATCATAAAAAAGAAAAAAGAAACCAAAATGGTGGTAATATTTATTGA 426 0.3404 MVGLSVVLESQKGGIISKNNKKTPQVINKAMMLNSFHKQSPFHHESHFQEQQHTTFLKLCFLCTKRLLPGKDIYMYKGDRAFCSVECRCKQIFMDEEESNNIQSENYYFAAISSSSSSSSSSSEASYHKKEKRNQNGGNIY* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3539 141 ProSiteProfiles Zinc finger FLZ-type profile. 55 99 IPR007650 -
Psa1g3539 141 PANTHER FCS-LIKE ZINC FINGER 5 1 136 - -
Psa1g3539 141 PANTHER FCS-LIKE ZINC FINGER 15 1 136 - -
Psa1g3539 141 MobiDBLite consensus disorder prediction 117 141 - -
Psa1g3539 141 Pfam zinc-finger of the FCS-type, C2-C2 49 97 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3539 Psa-Chr1 304758532 304760575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3539 - - cit:102608273 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3539 1 304758532 304760575 Psa1g3539 1 304758532 304760575 ECH