Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3536 ATGTTTCTTTCTCCTGTACCAACATTTTGGAGAATAATAAAGCATAGATCTACAGAAGATTTCTCTAGTTTTCCTTTCATATGCACATTGCTTAATTCCTCTTTATGGACTTACTATGGAACCATTAAAGCTGGAGAATACCTTGTGGCCACTGTTAATGGCTTTGGCATCTTGGTGGAGACTATCTATATTCTTCTTTTTCTCATTTATGCACCACAAAAAATGAGGGTTAAGACTGCAATTTTGGTTGGAATTTTGGATGTGGGAATTTTAGCAGCAGCAGTAGTAGCAACTCAGTTAGCATTAGAAGGAGAAGCTCGTAGTGGTGCTGTTGGAATCATGGGTGCAGCTTTGAACATTCTTATGTATGCTTCACCTCTTGCTGTAATGGTAAGTTTCTTCATCTTTCTAATTAACATTCAACTTTTTCTTATTATTTCTTCCTTTCTTCCTATTTCTAAAGTTTATATTAAATTTACCAAAAAAAAGATAAAAAATAGAGCAATGATTTGTGTTTGA 519 0.341 MFLSPVPTFWRIIKHRSTEDFSSFPFICTLLNSSLWTYYGTIKAGEYLVATVNGFGILVETIYILLFLIYAPQKMRVKTAILVGILDVGILAAAVVATQLALEGEARSGAVGIMGAALNILMYASPLAVMVSFFIFLINIQLFLIISSFLPISKVYIKFTKKKIKNRAMICV* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3536 172 Gene3D - 1 75 - -
Psa1g3536 172 PANTHER RAG1-ACTIVATING PROTEIN 1 1 145 - -
Psa1g3536 172 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET17 1 145 - -
Psa1g3536 172 Pfam Sugar efflux transporter for intercellular exchange 1 74 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3536 Psa-Chr1 304430246 304439175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3536 1 137 Miscellaneous Gene Families AT4G15920 53.595 1.04e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3536 K15382 - gmx:100808537 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3536 1 304430246 304439175 Psa1g3536 1 304430246 304439175 ECH