Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3529 ATGGAACCTTACACTTTGCCTTCATCATTAAAAGTGCTTACAAAATTTATGAACATTGATGTTTCATCTAACCATCTTTTTATGGTACTTTTGGTAACATGTTTAGCAACCTTTTACTTTGCATGTAGAAGAAAAATACACATTTATTTGATAGATTTTAATTGCTATTGTCCCCCAAGTTCGTATAGACTACCTAAAGCAATGTTTGAAGAGAACAATGTTTATGATGAAATGGAACAAGAAGCTGTTGATTTCCAAAGTAAAATCAATGCAAAATCTGGATTCAGCGATGAAACATCCATTCCTCCATCTCTTGCTCAAATACCGAAAGTTAAGGCTATCAGCCTTGCACTTGAAGAAGCTGAAACAATAATGTATACAGCAGTTAAAGATCTTTTAACAAAAACCAACATCAACCCGAGATCCGTGGACATTTTAATAACTAACAGTAGCATTTTCTGTCCTACGCCGTCTCTTAGTTCAATGGTGGTTAACAAGTTCATGATGAGAAGCAACATCATGAGCTTCAATTTATCAGGTATGGGATGCAGTGCTGGAATTATAGCAGTTAGTCTTGCTAAAGACTTGTTGAGAGTTCATAGGAACTCAATAGCTTTAATAGTAAGCACAGAGACACTTAGTTTAAATTGGTACACAGGGAAAGTTCCATCTATGCTACTAACTAATTGCTTATTCAGAATGGGAGGATCAGCTGTATTGATGTCTAGTAGGGTTCAAGATAAGCGTAAGGCGAAATATGAACTACAACATATTGTAAGAACAATCAATGCATATGATGATCAATCTTATGCATGTGTCTACCAGGACATGGATTCAGAGAACAAGGAAGGTGTATCGATATCAAAGAATATAGTCAATGTTTGTGGTGATGTGTTGAAGAAAAATATTGGTTCATTAGGACCATTGGTTTTGCCATGGAGGGAGCAATTCCTGTATGTAATTTCAATTCTTTGTTACAAAATATGGAGTAAAAGAACAAGCATATATACTCCAAACTTTAACAGGGCTTTTGAGCATTTCTGCATACATTCAGGAGGAAGAGCTGTTATACAAGCCATTGAAAGAAACTTGAAGCTAAAAAAACAGGATGTGGAGCCGTCGAAAATGTCTTTATATAGATTTGGAAACACTTCATCTGCTTCAATTTGGTATGAGTTGTCCTACATAGAAGCAAAAGGGAGGATGAAATGTGGAGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTCTATGTGATGTTAAGCCTGATAACACCACTGCATGGAGGGACACAATTCACTCATACCCAGTTGATATTTTGTGA 1353 0.3629 MEPYTLPSSLKVLTKFMNIDVSSNHLFMVLLVTCLATFYFACRRKIHIYLIDFNCYCPPSSYRLPKAMFEENNVYDEMEQEAVDFQSKINAKSGFSDETSIPPSLAQIPKVKAISLALEEAETIMYTAVKDLLTKTNINPRSVDILITNSSIFCPTPSLSSMVVNKFMMRSNIMSFNLSGMGCSAGIIAVSLAKDLLRVHRNSIALIVSTETLSLNWYTGKVPSMLLTNCLFRMGGSAVLMSSRVQDKRKAKYELQHIVRTINAYDDQSYACVYQDMDSENKEGVSISKNIVNVCGDVLKKNIGSLGPLVLPWREQFLYVISILCYKIWSKRTSIYTPNFNRAFEHFCIHSGGRAVIQAIERNLKLKKQDVEPSKMSLYRFGNTSSASIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCLCDVKPDNTTAWRDTIHSYPVDIL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3529 450 CDD CHS_like 35 424 - -
Psa1g3529 450 PIRSF Very_long_ch_3-ktacl-CoA_syn 4 450 IPR012392 GO:0006633|GO:0016020|GO:0016747
Psa1g3529 450 Pfam FAE1/Type III polyketide synthase-like protein 41 327 IPR013601 GO:0006633|GO:0016020|GO:0016747
Psa1g3529 450 SUPERFAMILY Thiolase-like 35 245 IPR016039 GO:0016746
Psa1g3529 450 SUPERFAMILY Thiolase-like 255 426 IPR016039 GO:0016746
Psa1g3529 450 Gene3D - 59 425 IPR016039 GO:0016746
Psa1g3529 450 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 344 425 IPR013747 -
Psa1g3529 450 PANTHER 3-KETOACYL-COA SYNTHASE 18 449 IPR012392 GO:0006633|GO:0016020|GO:0016747
Psa1g3529 450 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 18 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3529 Psa-Chr1 304009304 304010656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3529 25 447 Acyl Lipid Metabolism Gene Families AT1G71160 52.570 7.71e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3529 K15397 - gmx:100783404 724.546