Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3525 ATGGACGAAACCATATCCCGAATAGTAACGGAGATAGAAGACCTCCGCGAAAATCATCGTACCGACAACCCACAACCTCTCTCCGAACAATCCCTCTCAGATCTCCAAAAACTCATCAAAAACTCCGAAGCCCTAGACGCACTCTATGACGCCGTTTCACCTTCCCACCTCATTCCACCAATCGCCACCGCAATGGACTCATCTCCAACTCCTCACTCTCTCCTCGCTTCTCACGTCTTCCTCTCTTTTCTCCTCTCTCCAAATGCTCCCGTTTTCACTCTCTTTACTCCTCTTTCCTTTCTCTCCTTCCTCCGTTCAATTCGTCGCTCTTTCAAAAACAACAACTCTTCCAACAACTCTCAACAGCGTCCCAAGAGAAAACGCAATTCTAAAAACAAAAAAAACCCGGAAAATGACGAAGCTGAACCCAATTCCACAAATTCTCAACACAAACTCGATGTTAGGGTTTTGCTTTCTCTTTTCGAGAAGCTAGTTAGTGTTATGTCGCTAATTCACCTTGATCGTTTCCCGGAAAGTCTCAAATCGTTAATTCAAACCATTTCGGAGGTTCCTTTAACAGCTATTGAATCATGTGGAGATGAGTTTCAATACAGTAAGTTGGTTTCTCTATGCTCGAGGATTCTGAAAGAGGTTTTGAAACCGGAGCACGGTGAGCCTTCGGAGACTGCTGCTGAGGTTTTGAAGTCACTGTCTTCGATTGCTCCTATGCCGAAATCTCAAGTGAGGACTTTTGCTGTTAGTTTTGTGACGAGTCTTGCTAGGGATTCCGATGGTGTGAGGAGAGCTTTGGTTAATTTTCCAAGGTATTTGGCAATTAAGGCGCCTGATAAAGCTGAACCTAGAGGGATGTCTGTGGAATTTATCATGGAGGTTGTTAGGGTTATGGAATTGGAGGATCAAATTGGGTTTGTGAAGTATGTTGTGAAGATGACTCAAGGAAAAGGCAATTTAAGGCTTTTGGGGGTTGATCTTATTTTGAAATTGTTAACTACGTTGAAGGATCCTTTAGGAGTGAATTCCATGGTGGAAGAAGAAGAAGGGAAAGAGGCTTGGGGAATGCGGTGTTTGGAGGCATTGGTAAAGCGTTGTTCGGATGTTAGTGCTATGACTCGAGCTCGGGCAATATCGAATTTGGCGCAGGTTGTTGGGCTTCTATCATGTAGTGATAGGGCTACTGTGGTTTTAAAAAAGTTTATGGGTTTTGGTGATGGGAATAATGTGACTGTGGGAGGAAAGGGAATCAATGAGCTGCTGAGGAGAAGGTGTGTGGATGAGAAGGCGGTTGTGAGAAAAGCTGCTCTTTTGCTTGTTACTAAACTGACTGCTCTGCTTGGAGGTGCTATTGATGAAGTGGTGCTTAAGACAATGGGAATGGCTTGTTCCGATTCACTCTCTAGCATCCGGAAAGCGGCTGTTGAAGCTCTTTCTGAGGCTTTCAAAACATTCTCAGCTGAAACGGTAATAACTGAGTGGCTACACTCAGTCCCTCGTCAAATAGCTGATAATGAGACTAGCATCCAAGAAGAATGTGAGAATGTGTTTGAAGAACTTGTTCTGGACCGAATATCTAGAGGTGCAGCTTCTTCCTCTTCATATATTGGACCTACATCTGGTAGTAAAGAGAAAGAAAAAGGTGTAGACGAAGAGATGCAGATGTCTTTTCCTCCAGGGATTCTGTATCTCCTGAGAGAGATTTGCAATGGGGAGGTCAGTCCATGGGTTAAAAAAATTTGCACAAATTTGGGCAAAAAGAAACGCTTGAAACACAAAATTGTTACTGCACTTCAGAATATAATCAAGGTGTCCGAGTCTATCTGGCTGAACCATAGCAAGCCAATAGAAAAGTGGACTGCCCCATCAGGCGCTTGGTTTCTTTTATCAGAGGTGTCAGTATTCCTTCCAAAAGCAGTGGACTGGGATTTTCTTCATCATCATTGGCAGCTTCTTGACAAACATAAAGTGAAAGGTGAGTTTCAAAGTCCATTTGTACAGAAAAATGCAAATGGAGAGGAAGAAAGCATAGAATGCAACAATGTTGCCTGGGCTAGTGACCGAGTTTTCCTATTGCAAACAATCTCTAATGTTTCTATCGAGCTGCCACCTGAGCCTGCTGCTGACTTGGCTCACAACTTGCTCAAACGGGTTGAAAAATTCAACATGCATTCAACAGAGGTTGATGCTCATGTAAAAGCACTTAAAACATTGTGCAAGCGAAAAGCTTCAAATGACATGGAGGCAGAAGCATTAGTCTTGAAATGGGTAGACCAAGTTCTGTCTAGAGCTTCTCGAATAATAGAAACTTTTATTTCAGATAATTCAGAGCAAGATGCAGAAACTGGCTTCTTTACTCCACCTAGAAGTGGGCCTAGTAAAGGTAGGAAATCAGTACGAAAGCGCAAATCATTGTCAAAAGCAATCACGGCAATTTATACAATTGGGTCTTTAGTTATTGTCTGCCCATCTGCTGATATGAGTGCTGTAACTCCATTATTGCACACTATCATCACCTCTGGGAATTCAGGCCCAAAATTAAATAAGCTACCCGGCCCTGCAACCACTCTACAACAAGAAGCTCCTTCTTTTTATATTCAAGGGTGGCTGGCCATGGGCAAACTTTGCCTTGCTGATGGGAAGCTTGCAAAAAACTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGAGCGATGCTGCAGCTCTTCGCAATAATATTGTGGTCATGATGGCAGACTTCTGTGTTCGGTACACTGCTCTTATTGATGGTTATATAACCAAGATCACAAGGTGTCTTTTAGATCCCTGTGAACTTGTGAGAAGGCAAACATTCATACTGCTATCCAGACTGTTGCAGAGGGACTATGTGAAGTGGAGAGGAGTGCTATTTCTTCGTTTCCTTTTGTCACTTGTTGATGAATCAGAAAAGATTAGGCAGCTAGCAGATTTTCTCTTTGGAAATATTTTGAAAGTCAAGGCTCCTCTCTTAGCATATAATAGTTTTGTTGAGGCTGTTTTTGTTTTGAATGACTGCCATGCCCATATTGGACATCGTGAGTCTGGCGAATCACGAAAGGACAGCCAACTTTTCTCCATCAGGGGTTCTGATGAAAAATCAAGGTCTAGAAGAATGCATATTTATGTTTCTCTACTAAAGCAAATGGCTCCGGAACATCTTCTCGCAACCTTTGCCAAGTTATGTGCAGAAATTCTAGCTGCAGCTTCTGATGGTATGCTCAATATAGAAGATGCAACGGGACAGTCTGTTCTACAGGATACTTTTCAAATTCTTGGCTGTAAAGAGATACGCATTCAATCTACTCGTGGATCATCTGAGTCGGCAGACTTAGAAGAAGAAGGGGGAGAAAATGGATCTTCAACTAGAAAGGCTATAACTCAGGCAGTCAAGAAGGGCCTCATTCAAAACACCATACCCATCTTCATAGAGTTGAAACGTCTACTGGAAACCAAGAACAGTCCCCTCATAGGTTCTCTCATGGAATGCCTTCGGGTCCTTCTCAAGGACTACAAGAACGAGATCGATGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAGCTGATCTATGACATGCAGAAATATGAAGCGGCAAGAGCTAAAGCAACAGTTGCCGAGGCTGTAGCCTCCAAGCCAAAACCAGATGCAAATCAATCACCTGATGATTCTAAGAATCTGAACAAGGAACAAGGACAAACACATGAACAAAATGAGGAGAATGACCAGTTCCCAAGTGGTTCGAAAATTGCTACGGCAATGGCAGATGCTGCAGCTGCAGCAACAGCTCGTTCTGTGCTCAAGGAAATTAACAAGGGGACAGTGACACCACAGCTTAGTTCTTTAAATGTTCCGAAAGTGAAGTCTTTTACAGGTGAATGCATAACTAGAGATGATAAGCGTTTGGATGTCATAAAGTCTTTGAAGAAAAAACATGCTTTTGATTCTGATGACGAAAACTAA 3990 0.4271 MDETISRIVTEIEDLRENHRTDNPQPLSEQSLSDLQKLIKNSEALDALYDAVSPSHLIPPIATAMDSSPTPHSLLASHVFLSFLLSPNAPVFTLFTPLSFLSFLRSIRRSFKNNNSSNNSQQRPKRKRNSKNKKNPENDEAEPNSTNSQHKLDVRVLLSLFEKLVSVMSLIHLDRFPESLKSLIQTISEVPLTAIESCGDEFQYSKLVSLCSRILKEVLKPEHGEPSETAAEVLKSLSSIAPMPKSQVRTFAVSFVTSLARDSDGVRRALVNFPRYLAIKAPDKAEPRGMSVEFIMEVVRVMELEDQIGFVKYVVKMTQGKGNLRLLGVDLILKLLTTLKDPLGVNSMVEEEEGKEAWGMRCLEALVKRCSDVSAMTRARAISNLAQVVGLLSCSDRATVVLKKFMGFGDGNNVTVGGKGINELLRRRCVDEKAVVRKAALLLVTKLTALLGGAIDEVVLKTMGMACSDSLSSIRKAAVEALSEAFKTFSAETVITEWLHSVPRQIADNETSIQEECENVFEELVLDRISRGAASSSSYIGPTSGSKEKEKGVDEEMQMSFPPGILYLLREICNGEVSPWVKKICTNLGKKKRLKHKIVTALQNIIKVSESIWLNHSKPIEKWTAPSGAWFLLSEVSVFLPKAVDWDFLHHHWQLLDKHKVKGEFQSPFVQKNANGEEESIECNNVAWASDRVFLLQTISNVSIELPPEPAADLAHNLLKRVEKFNMHSTEVDAHVKALKTLCKRKASNDMEAEALVLKWVDQVLSRASRIIETFISDNSEQDAETGFFTPPRSGPSKGRKSVRKRKSLSKAITAIYTIGSLVIVCPSADMSAVTPLLHTIITSGNSGPKLNKLPGPATTLQQEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQELEKSDAAALRNNIVVMMADFCVRYTALIDGYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKAPLLAYNSFVEAVFVLNDCHAHIGHRESGESRKDSQLFSIRGSDEKSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDTFQILGCKEIRIQSTRGSSESADLEEEGGENGSSTRKAITQAVKKGLIQNTIPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAARAKATVAEAVASKPKPDANQSPDDSKNLNKEQGQTHEQNEENDQFPSGSKIATAMADAAAAATARSVLKEINKGTVTPQLSSLNVPKVKSFTGECITRDDKRLDVIKSLKKKHAFDSDDEN* 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3525 1329 MobiDBLite consensus disorder prediction 1216 1254 - -
Psa1g3525 1329 SUPERFAMILY ARM repeat 154 611 IPR016024 -
Psa1g3525 1329 Coils Coil 1177 1197 - -
Psa1g3525 1329 PANTHER CONDENSIN 3 1317 IPR026971 GO:0007076
Psa1g3525 1329 SUPERFAMILY ARM repeat 50 992 IPR016024 -
Psa1g3525 1329 Gene3D - 362 529 IPR011989 -
Psa1g3525 1329 MobiDBLite consensus disorder prediction 132 146 - -
Psa1g3525 1329 Pfam non-SMC mitotic condensation complex subunit 1 906 1097 IPR032682 -
Psa1g3525 1329 MobiDBLite consensus disorder prediction 112 148 - -
Psa1g3525 1329 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 3 1317 - -
Psa1g3525 1329 MobiDBLite consensus disorder prediction 1112 1132 - -
Psa1g3525 1329 MobiDBLite consensus disorder prediction 783 805 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3525 K11491 - gmx:100781242 1865.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3525 1 303801755 303808009 Psa1g3525 1 303801755 303808009 ECH