Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3517 ATGTTGGTTTACCAGGATCTCCTTACAGGTGATGAGCTTTTGTCAGACTCTTATCCATACAAGGAAATTGAGAATGGAATGTTGTGGGAAGTTGAGGGGAAGTGGGTTGTCAAGGGAGCAGTTGATGTGAACATCGGTGCAAACCCTTCTGCCGAAGGTGGAGAAGATGAGGGTGTTGATGACACTGCTGTTAAGGTGGTTGACATTGTTGATGTATTCAGACTTCAGGAACAACCTCCTTTTGACAAGAAGCAGTTTCTTGGCTTTGTTAAGAAGTATATTAAGTTGTTGACTCCCAAACTAGAAGCAGAGAAACAAGAGCACTTCAAAAAGAATATTGAGGGAGCAACCAAATACCTCCTTGGCAAGCTCAAGGACCTTCAGTTCTTTGTTGGTGAGAGCATGCATGATGATGGTAGCTTGGTCTTTGCCTACTACAAGGATGGTGCTGCTGACCCAACTTTTCTCTATTTTTCTTTTGCTTTGAAGGAGATCAAGTGCTAA 504 0.4286 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGGEDEGVDDTAVKVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGKLKDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFSFALKEIKC* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3517 167 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 1. 45 55 IPR018103 -
Psa1g3517 167 PRINTS Translationally controlled tumour protein signature 1 21 IPR018105 -
Psa1g3517 167 PRINTS Translationally controlled tumour protein signature 46 57 IPR018105 -
Psa1g3517 167 PRINTS Translationally controlled tumour protein signature 59 78 IPR018105 -
Psa1g3517 167 Pfam Translationally controlled tumour protein 1 163 IPR018105 -
Psa1g3517 167 SUPERFAMILY Mss4-like 1 167 IPR011057 -
Psa1g3517 167 ProSiteProfiles Translationally controlled tumor protein (TCTP) domain profile. 1 167 IPR034737 -
Psa1g3517 167 PANTHER TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOG 1 167 - -
Psa1g3517 167 PANTHER TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED 1 167 IPR018105 -
Psa1g3517 167 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 2. 124 146 IPR018103 -
Psa1g3517 167 Gene3D Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 1 167 IPR011323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3517 Psa-Chr1 303462492 303465054 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3517 - - rcu:8278734 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3517 1 303462492 303465054 Psa1g3517 1 303462492 303465054 ECH