Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3469 ATGGAAGATAATACCGAGCTTGAAGAAGGAGAGGCTTGCTATTATAAGGACGATGATGAAGACAACACTGACCTTGATTCCCTCTCTTACATTGACGAGAGGATTCAACATGTTTTGGGCCATTTTCAAAAGGATTTTGAAGGTGGTGTTTCTGCTGAAAATTTGGGTTCCAAATTTGGTGGCTATGGTTCCTTTCTACCTACCTATGAACGCTCTCATCCAAAGACTCCACTAGGAAACCAAAGCTCGCCACAATCTCCTATTGTTCTCCACAAGGAGGCTGTGCCTGATAACAGAAAAGCGCCCTCAAATATGGCTCCTGCTGCGAGGATTGGAAATGCTTCTCATAGTTCAAATTCGTTTCGTGATGTAAGGGCAGCTTCGATAGATGTCTCAGTGAAGAAAGACAGTGGAATTTCTTCCAATGATGTAGCTGGAAGGTGCACTTTGAAAGATGACACTCCAATTAAGAAGGGAAATTCAACTGACCATAGAACGCTGAAGTTTAGACTCAAAATGAATTCCAACTTCTTAGCGCAAACGACTGCAGAAATTTATAGTGGCCTTGGGCTTGATGACTCCCCGTCTTCCTCAATGGAGAACAGCCCTGTGGAAAGTGAAGGCACTCCTCCACCCCCACCTCCACCTGTATCTAAAGCCAAAGCCGAAGATTCTGCAATTGAAATTATTCAGGCTATGACTTCCTGTGCGATCCCTGGTGGTATCTTACTATCACCTCTACCTGAAAGTTTGCTCTTCTCAGTGAAAAATGAAAAAGTTCACGGAGACGTCAGATATATGTCTTCTCGTGAACCTCGTTCCATGTCTACTGATGAGTCAGATTCTTTTGTTGCGGACGGGCATTTGAAGAAGAGGATAGTGAGAATAGTTAGACAAAAGGAAAAGAAGTTGGAAGCGAAGCAAATAAATGACACCCTTTCTGTGAGTGATATGGCATTGCATGTGAAGAAAAGGTTGGGAAATAGGACACCAGATTGCAATGAACTTCTCTCTATTGACATGAAATCAACACCTCTGTCAAGTTCAATTTGTGATGCTGGTGAAACTGCAGTAGCCACTGCTAAAGCCTCTAATGTTGCCAAAAAGTTTAGTGAGAATGGTGTTCAAGGCAGAATTGTGTCTGTGGAACCATTGAAGGAGGAGTCATTGGAGTCTATATCTGGTCAGGATTTTAAAAAGATTGAAAAGCAAAGTGTGGGAAATGGTTTTAGGAAAAATGTTTTAGAAGAAAAACTGGAAAATTCCCTAAAGGATAGTTCTGCTGATCCTAAGAATGACAGCAAGTGTAATACTTACATGATTTCCAAAAATGTTGAACGCGATGGAGGCAAACGTAAGATTGACCAAAGGTATGAGACCCCTCAGAGGGTGAAGGTTGTATCTGAAAGGAGGAACAAGTCAAAGGGTGATGAAAGTCCTGGGAAACCTGAGTCTGTTGGCAGAAAAGATACCTTTGGTGGTGCTAATAATGCAATGGTAAGTGATAAAGGGAGTGCTGGATTTGGCACGGTTAGTAGAAATAAAATGAGCAAAACAAAGGTACAGAAGGATAGTAAGGTCAGAGACAGTACCAAAGTATCATTGAAAGAAAAAAACTCAGATCAGAAAGTCGATGATTTTCCTGGTAATAGTGCTGTTAAGACTTCTAAGTCTAACAATAATAATGAAAAACAGACTGCATTTGGCGCTAAACTAAAGGAAAGATTAAGTGACAATAAAGTGGTTAACCACTCGCTAGCTGGGCCGCGCAAAACAGATGATCTGGGTTCATTTCCAATGGCTGTAAATAATGCTGCTCTGGAGATGATTCCAACAGCAGTAGCAGCACCTCAACTTATTGCAGAAGATTGGGTAGCTTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTACTGGCTTAAAGCCAGAGCAACTTCCAGAGAAATGGTTGTGTGTCATGCTTAATTGGCTGCCTGGGATGAATTCTTGTGACTTTAGTGAGGATGAGACAACAAAGGCATTGTATGCTTCATATCAAATGCCGATTTCTGAGGGTCAAAATAACTTGCAAACGCATGCCTCTGAAACTGCATTTGGAAAAATGCCGATTTCTGAGGGTCAAAATAACTTGCAAACGCATGCCTCTGAAACTGCATTTGGAGTGAGCTCTGCTGATGCTTCACAGTTTGGTCTGAATCACAAAAAGTCCAATTCTAGCGTGTTGCATGACCAAGGAAAGAAGAAACCTTTTTTTAAGGAAAGGATAGTGTCAAAGCTCAGTGCTCAAGCATCAGGAAAAAATAGAAACTTGAATCAACATCCTACAGATTCAAAACCAATGAAGATGAAACATCCCAGCAGGTCTAACAACACGATAGAAGAGAAATGTGCGTCTGAAGAGAGAGAAAAGCAAACAAGTGAAGGTACCAGAAAGTATATTAAGTTAAAACGCAAGGTGGATGCTGATCAATCTAGTTCAGGAACTCCTAAGAAATCAAAAACTGAACATGTTCCCTATGCTGATAAACAACTGAATCCTGGCATGGGCCTTGGGAAGGTTGTTCTAAATGCAAGAGGCAGTTTACCAACAAAAGCTAGCAGAAAGGAGGTGAGGAAGTATGATGAGTTTGGTTTACCCGAAGATGATGAGGATAGCTTACTAGTCCCAGAAAAGAAGGAGGGAGATCAGGCTGAAGTCACTTCTGGTGTTGGCTCCTTGAATGTGAAGAGTAGCAGCAAAAATGGCAGTTTAAGGAAGAAACAGAAATTCAATGACTGGCCAGATGATGAGACTGAGAAGCATAACAGCTCATCCTCTTTGCATGGTAATAAACAGTGTGGCGAGCAGGGAAGCACAAGTAAACTTTGGAAGGAAAATCAGTATAAAATTTTGAATAAAGAGGAAAATTTCGTTGCTGCTGATGATGATAAATTGAGGAAAGGTAGGGTGAGGCGAGTTTCCTTACCAGGAAGTCGGGACCAAACGACTGTTGAGACAGAAGGAAGATATGTTGATAAAGACTATCAGCCAATGAAGCGCAGAAAAAGTATTGCATCTCATCAAGCTTTGGATGTTATTGCTCCATTGGGCTCTGGACGACAACTAGCATTTGCAGCAACTTCAAGCTCTTCAAAGGTTTCAGGCTCTCATAAAGTTAGAACCAACTTTGATGACGTGAAAGGTTCTCCTGTGGAATCTGTTACTTCATCACCTTTGAGGTCGTCTAACCTCGATAAACATGTTTTGACAGCAAGGCACATTTCAGTGAAGGATGATGCTGTAAAAGTCAGCCTTTCTTCAAGAAAAGGCGCGAACAATGGGAAGGGGAAGTTATCATTAAAATTGAAGGGGGACAAGATTTCATATAATGCACATCCTGCACCCAACAAAATAACTTCAACAGAGTACCAAGTTAAGGAAGCTAAAGACAAAGTCAGGGTCCAAGCAAAAACTTCTGAAATTAAGAGTAATCGTTTGCTTGGGGTTCCCGTTGAAGAACATGACAATAGTGGCATGCGTCACGAGGAGAAAGTGAACAGGAACAAACAGGACGAACTGTCTGGGAAGAAACCCAACAAGGTGACATCATTGCAAAGCATGGAAAAGAACAGAAGGCCTGGTTCTCAGGTTGGTACAGATAAGACGAAGGTTTTGACTTCAGAGAGTTGTTTTTCTAAAAATGGGGAAAGGCATGATTCACAAGTCGACCCTATTGGTACCGACACAAGTTATGATGCTAAGTACCGTTCTCTTATGTCTAAATGTGAGATTGACAGTGTTAGTCACAAGAGTGCTTTAAGACACGGGCCAACTGAAACTGGAAAGCAAACTGAGCTGAAACAAAATGACTTTGAGAAATCTGTTATGAAGATGGATACTCAACGTTCTACTGGTAGTAAGAGAAAGGGTACATTCCAGCAAAACACGACTCAGGATGCCGAGGAAGAAAACAAAGCTAATCACGAATGCACGGAATCAAGAGATAGGAAATCCAAAGTTCTCTTATCTGCTGATGGTGAAATAAAAAGGGAAACATTTGCTGTACCACGGTATCAAAAGGGAGATATCTCTAATGAACATCCAGCTTCTGCAGGCAACAGTGGTTTGACCAAGTTAGTGAGAAATTCTGCTGATTCTAGCGGCAATGTCTTAGTTAATTGTAGTTCTGGAAGTGTTGCACCTGGCCAACAACTCACCGTGTCAAGTCCTGTGAGAACAAGTGCTGAGCAAACTGCCGTTGGCACCCTGGAAGATGCCGCAAGACTAAAAGAAAGTGCAGGTCACTATAAGAATTCTGGATTTGATTTTGAAAGCAATGAGACCTACTTTCATGCTGGTTTGAAGTTTCTGCACGGAGGATCTCTCTTAGAAAGTTGTCACAATGAGATTAGCAAGTACGGGGAGATGAGTCAAATGCAAATTTATGCCACAGCAGCCAAACTTTTCAAGTCATGTGCCCATGAATATGAAAATCGTCAAGAAATGGCAGCAGCTGCTTTGGCATATAAATGCATGGAGGTGGCATACATGAGAGTGGTTTACTGTAAACATTCTAGTACAAACCGAGATCGGTGTGAGTTGCAATCAACTCTTCAAGTGGTTTCTCAAGGTGAATCTCCTTCATCTTCAGCATCTGATGTTGATAACTTAAACAATCAAGTGGCAATGGATAAGGCTACTTTGCCCAAGGTTACTAATGCTCATGCTGCCGGTAACCACGTTATATCTGTTCGAACTCGTCCGAGTTTGGTCAGGCTTCTTGATTTTACTCAGGATATAAATTTTGCTATGGAGGCTGCTACAAAATGTCACAGCACTTTCTCCGCAGCCCATGCGACAATGGAAGAAACACGGAATAGGGACTGTATAACTTCAATTAAGAGGGTTATTGATTTCAGTTTCCAGGATGTAGATGAGCTTGTACGCCTGGTTCGAAATGCAACCCATGCGACAATGGAAGAAACACGGAATAGGGACTGTATAACTTCAATTAAGAGGGTTATTGATTTCAGTTTCCAGGATGTAGATGAGCTTGTACGCCTGGTTCGAAATGCAACAAAAGCAATAAGTGGTGCTGGTCTTGGTGGTGCTAGAGATTAA 5100 0.4178 MEDNTELEEGEACYYKDDDEDNTDLDSLSYIDERIQHVLGHFQKDFEGGVSAENLGSKFGGYGSFLPTYERSHPKTPLGNQSSPQSPIVLHKEAVPDNRKAPSNMAPAARIGNASHSSNSFRDVRAASIDVSVKKDSGISSNDVAGRCTLKDDTPIKKGNSTDHRTLKFRLKMNSNFLAQTTAEIYSGLGLDDSPSSSMENSPVESEGTPPPPPPPVSKAKAEDSAIEIIQAMTSCAIPGGILLSPLPESLLFSVKNEKVHGDVRYMSSREPRSMSTDESDSFVADGHLKKRIVRIVRQKEKKLEAKQINDTLSVSDMALHVKKRLGNRTPDCNELLSIDMKSTPLSSSICDAGETAVATAKASNVAKKFSENGVQGRIVSVEPLKEESLESISGQDFKKIEKQSVGNGFRKNVLEEKLENSLKDSSADPKNDSKCNTYMISKNVERDGGKRKIDQRYETPQRVKVVSERRNKSKGDESPGKPESVGRKDTFGGANNAMVSDKGSAGFGTVSRNKMSKTKVQKDSKVRDSTKVSLKEKNSDQKVDDFPGNSAVKTSKSNNNNEKQTAFGAKLKERLSDNKVVNHSLAGPRKTDDLGSFPMAVNNAALEMIPTAVAAPQLIAEDWVACDSCQKWRLLPTGLKPEQLPEKWLCVMLNWLPGMNSCDFSEDETTKALYASYQMPISEGQNNLQTHASETAFGKMPISEGQNNLQTHASETAFGVSSADASQFGLNHKKSNSSVLHDQGKKKPFFKERIVSKLSAQASGKNRNLNQHPTDSKPMKMKHPSRSNNTIEEKCASEEREKQTSEGTRKYIKLKRKVDADQSSSGTPKKSKTEHVPYADKQLNPGMGLGKVVLNARGSLPTKASRKEVRKYDEFGLPEDDEDSLLVPEKKEGDQAEVTSGVGSLNVKSSSKNGSLRKKQKFNDWPDDETEKHNSSSSLHGNKQCGEQGSTSKLWKENQYKILNKEENFVAADDDKLRKGRVRRVSLPGSRDQTTVETEGRYVDKDYQPMKRRKSIASHQALDVIAPLGSGRQLAFAATSSSSKVSGSHKVRTNFDDVKGSPVESVTSSPLRSSNLDKHVLTARHISVKDDAVKVSLSSRKGANNGKGKLSLKLKGDKISYNAHPAPNKITSTEYQVKEAKDKVRVQAKTSEIKSNRLLGVPVEEHDNSGMRHEEKVNRNKQDELSGKKPNKVTSLQSMEKNRRPGSQVGTDKTKVLTSESCFSKNGERHDSQVDPIGTDTSYDAKYRSLMSKCEIDSVSHKSALRHGPTETGKQTELKQNDFEKSVMKMDTQRSTGSKRKGTFQQNTTQDAEEENKANHECTESRDRKSKVLLSADGEIKRETFAVPRYQKGDISNEHPASAGNSGLTKLVRNSADSSGNVLVNCSSGSVAPGQQLTVSSPVRTSAEQTAVGTLEDAARLKESAGHYKNSGFDFESNETYFHAGLKFLHGGSLLESCHNEISKYGEMSQMQIYATAAKLFKSCAHEYENRQEMAAAALAYKCMEVAYMRVVYCKHSSTNRDRCELQSTLQVVSQGESPSSSASDVDNLNNQVAMDKATLPKVTNAHAAGNHVISVRTRPSLVRLLDFTQDINFAMEAATKCHSTFSAAHATMEETRNRDCITSIKRVIDFSFQDVDELVRLVRNATHATMEETRNRDCITSIKRVIDFSFQDVDELVRLVRNATKAISGAGLGGARD* 1700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3469 1699 MobiDBLite consensus disorder prediction 1289 1336 - -
Psa1g3469 1699 PANTHER CW-TYPE ZINC FINGER 701 1650 - -
Psa1g3469 1699 PANTHER CW-TYPE ZINC FINGER 1 700 - -
Psa1g3469 1699 PANTHER CW-TYPE ZINC FINGER 1647 1693 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 760 776 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 918 937 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 900 914 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 191 205 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 1167 1189 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 1291 1313 - -
Psa1g3469 1699 Gene3D - 619 673 - -
Psa1g3469 1699 ProSiteProfiles Zinc finger CW-type profile. 618 671 IPR011124 GO:0008270
Psa1g3469 1699 MobiDBLite consensus disorder prediction 421 563 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 872 897 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 759 845 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 445 485 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 545 563 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 1165 1213 - -
Psa1g3469 1699 PANTHER CW-TYPE ZINC-FINGER PROTEIN 701 1650 - -
Psa1g3469 1699 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 700 - -
Psa1g3469 1699 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1647 1693 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 777 824 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 1314 1336 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 190 223 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 872 953 - -
Psa1g3469 1699 Pfam CW-type Zinc Finger 624 669 IPR011124 GO:0008270
Psa1g3469 1699 MobiDBLite consensus disorder prediction 938 953 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 517 544 - -
Psa1g3469 1699 MobiDBLite consensus disorder prediction 1190 1213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3469 Psa-Chr1 300856083 300863700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3469 - - gmx:102667636 1818.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3469 1 300856083 300863700 Psa1g3469 1 300856083 300863700 ECH