Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3461 ATGTCTCTAAGATCACAAACCCCACCACTCCATCATCATCATCAATCTCTCACCATGAACCCTACCAATGAAAACGACACAATTGACATAGAATGCATTGATCATCAAGAAGAAACACAACATCATCAAAATCAACCATCACCGATCATCAACAACAATAATCACCTGCATGCAGATGAAAAATCATTCACAAACAAAAGGTACATGCCCCTCTTGATAATCAACTACCTCTTACTCTTTGTTGGTTCCATCTCATCAAGTTTACTCTCTAAATACTATTTCATCCACAAAGGTTCAAGTAAATGGGTTTCAACTTGGGTTCAATGTGCTGGTTTCCCTCTCTTAATCATCCCAATTTTTCTCCCTTATATCCTCAACTCCACCAAAAGAACACCCTTTACTGATTTCACTACAAAAATGTTAACTTTATCGATTTTCGTCGGTATCATGTTAGGGTTGAACAATCTTTTAATCTCATGGGGTGTTGCCTATCTTCCGGTTTCAACTTCAGCACTTTTGTTATCTTCTCAACTTGTTTTCAATCTCATTCTCTCAGCTATCATAGTGAAACAAAAAATCACTTTTTCAAATCTCAATTGTGTTATTCTCTTAACCCTAAGTTCAATCATTCTTGCATTGAACTCAAGTAGCGAAAAACCAGAAGGGCTAACGAAAAAAGAATACTTTATTGGATTCTTTTGCACCATAGGTGCAGGATTGTTATTCGCACTATATTTACCAGTAATGGAGAAGGTTTATAAGAAAGTTTATTGTTACGAAATGGTGATGGAAATGCAGCTTATAATGGAGATTGCAGCGACGGTTTTAGCGACGGTGGGAATGACATTCGACGGTGGATTTTCGGAGATGAAGAGAGAAAGTGAAGAAGTGTTTGACAAGGGAAGTAGAGTTTATTGGGTGACGGTTATGGCGAATGTGGTGACGTGGCAGTTTTGTTTCATGGGAACTGCTGGGATGGTGTTTTTGACATCTTCATTAACCGGTGGAATTTGTATGACAGCATTGTTGTCTATGAATGTGTTGGGTGGTGTTTTGGTTTATAGAGATTCATTTGGTGGTTTGAAAGCTGTTTCAACTGTTTTGTGTTTGTGGGGATTTTGTTCTTATGTTTATGGAATGTATGTTAAGATGTTGAAAGAGAAAGGGAGAATGGTGAAGGAAAAAGATGATTCATCCATGGAGTTGGCTAGTATGAGGAGGAATGGAGGTGCAAATAGTTGA 1242 0.3784 MSLRSQTPPLHHHHQSLTMNPTNENDTIDIECIDHQEETQHHQNQPSPIINNNNHLHADEKSFTNKRYMPLLIINYLLLFVGSISSSLLSKYYFIHKGSSKWVSTWVQCAGFPLLIIPIFLPYILNSTKRTPFTDFTTKMLTLSIFVGIMLGLNNLLISWGVAYLPVSTSALLLSSQLVFNLILSAIIVKQKITFSNLNCVILLTLSSIILALNSSSEKPEGLTKKEYFIGFFCTIGAGLLFALYLPVMEKVYKKVYCYEMVMEMQLIMEIAATVLATVGMTFDGGFSEMKRESEEVFDKGSRVYWVTVMANVVTWQFCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVYRDSFGGLKAVSTVLCLWGFCSYVYGMYVKMLKEKGRMVKEKDDSSMELASMRRNGGANS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3461 413 Pfam Purine nucleobase transmembrane transport 71 384 - -
Psa1g3461 413 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 3 395 - -
Psa1g3461 413 SUPERFAMILY Multidrug resistance efflux transporter EmrE 128 216 - -
Psa1g3461 413 PANTHER OS09G0467300 PROTEIN-RELATED 3 395 IPR030182 GO:0015211|GO:0016021
Psa1g3461 413 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3461 Psa-Chr1 300441554 300443339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3461 52 379 Organic Solute Cotransporters AT1G30840 63.988 3.25e-146 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3461 - - cam:101488564 571.237