Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3460 ATGATAACATCTGTGAAGAATGATAGTGATGACATTGAATCCATTGATCAAGAAAGTGGAGAAGAAACTACTCATCTAGATCTAACCGATTCCTCCATCAACAACAAGACAATGCTGCACCATCTGCATGCAGATCAAAAGTCTACCATTAACAAAAGGTACATACCCCTTTTGGTAATCAACTATCTTTTCCTCTTTCTAGGGTCACTTTCTTCAAGTTTACTCTCTAAGTACTATTTCATCCACAAAGGTTCAAGTAGATGGGTTTCAACTTGGGTTCAATCTTCTGGTTTTCCTCTCTTGATTATCCCTATTTTGTCACCTTACTATCTCTTTCAATCAACAAAAAGAAAACCCTTTTCTGATTTCAACCCAAAAATGTTAACTTTTTCGGTTTCAATCGGTGTTATGTTGGGAGTTAATAACCTTTTCTTCTCATGGGGAAACTCTTATCTCCCTGTTTCAACCTCTGCTCTGTTGTTATCTTCCAACCTTGTTTTCAACCTTGTTCTCTCTGTCATCATTGTGAAGCAAAAAGTAACCTTTTCGAATCTCAACTGTGTCATGCTTCTTACATTAAGCTCAATCCTTCTAGCATTGGATTCTAGCAACGAAAAACCAAACGGGCTAACGAAAAAAGAGTATTTCGTTGGATTCTTTTGCACCATCAGTGCAGGGTTGTTGTTTGCTCTGTATTTGCCAGTGATGGAGAAGGTTTACAAAGAGGTTTATTGTTACGAAATGGTGATGGAAATGCAGTTTATAATGGAGATTGCAGCGACGGTTTTAGCGACGGCGGGAATGGCGTGGGATGGTGGATTTTCTGAGATGAAGAGAGAAAGTGAAGAGGTTTTTGATAAGGGGGGTAGAGTTTATTGGGTGACGGTTATGGCGAATGTGGTGACGTGGCAGTTTTGTTTCATGGGAACTGCTGGGATGGTGTTTTTGACATCTTCATTAACCGGTGGTATTTGTATGACAGCATTGTTGTCTATGAATGTGTTGGGTGGTGTTTTGGTTTATAGAGATTCATTTGGTGGTATTAAGGCTGTTTCAACTGTTTTGTGCATGTGGGGATTTTGTTCTTATGTTTATGGAATGTATGTTAAGATGTTGAAAGAGAAAGGAAGAATGAGGAACCAGAATGAGTCATCTACTGAGATGATTTACATAGGGAATCATGATGATGTGACTGATTGA 1200 0.3875 MITSVKNDSDDIESIDQESGEETTHLDLTDSSINNKTMLHHLHADQKSTINKRYIPLLVINYLFLFLGSLSSSLLSKYYFIHKGSSRWVSTWVQSSGFPLLIIPILSPYYLFQSTKRKPFSDFNPKMLTFSVSIGVMLGVNNLFFSWGNSYLPVSTSALLLSSNLVFNLVLSVIIVKQKVTFSNLNCVMLLTLSSILLALDSSNEKPNGLTKKEYFVGFFCTISAGLLFALYLPVMEKVYKEVYCYEMVMEMQFIMEIAATVLATAGMAWDGGFSEMKRESEEVFDKGGRVYWVTVMANVVTWQFCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVYRDSFGGIKAVSTVLCMWGFCSYVYGMYVKMLKEKGRMRNQNESSTEMIYIGNHDDVTD* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3460 399 Pfam Purine nucleobase transmembrane transport 57 371 - -
Psa1g3460 399 MobiDBLite consensus disorder prediction 9 25 - -
Psa1g3460 399 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 31 382 - -
Psa1g3460 399 MobiDBLite consensus disorder prediction 1 26 - -
Psa1g3460 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 120 203 - -
Psa1g3460 399 PANTHER OS09G0467300 PROTEIN-RELATED 31 382 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3460 Psa-Chr1 300415758 300417751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3460 41 366 Organic Solute Cotransporters AT1G30840 63.964 8.42e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3460 - - cam:101488564 600.127