Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3416 ATGGCTTCTACAAAAGTCAATGATGACCATGAGCCACAAAGAAGCTATTGGAGATGGAGCAAACAAGATTTCTTTCCAGAGGAATCCTTTCAAAGCTGGCACAACTATGGTTCTGCTCTTTCACAAACATGGTTAAGGTTCAAGGATCGTGTTTCGACCAGATCAGACGATGCAACCGAGTCACAAGAACTTAAGAAACAAAGTGAGAATGAAATGAAAAAATGTCTCAACTGGTGGGACCTGATCTGGTTTGGCTTTGGTGCAGTGATTGGTGCAGGAATCTTTGTGTTAACTGGCCAAGAAGCTCATAACCATGCTGGTGCAGCAATAGTCTTATCCTATGTAGCTTCAGGAATTTCAGCAATGCTTTCTGTTTTCTGTTACACAGAATTCGCCGTCGAAGTTCCAGCTGCAGGTGGTTCATTTGCTTACCTAAGAATTGAATTAGGTGATTTTGTTGCTTTCATAGCAGCCGGTAACATACTTCTCGAATGCGTGCTTGGAGGTGCAGCAGTATCTAGATCATGGACTTCTTACTTCACAAGCCTTTTGAATCGTCCGAAAGATTCGTTTCGAATCAAAGCACATCATCTCAAAGATGGATACAATTTACTTGACCCTATAGCAGTTGTTGTTCTGTTAACCGCCGGAACGATCGCAATGATCAGCACAAGAAAAACTTCGCTTCTCAATTGGATTGCATCGGCAATCAACACTGCTGTAATAATATTTGTAATCATTGCAGGGTTTCTTCACGCAGATACATCGAATTTGACGCCTTTTTTACCCTACGGAGCTAGAGGTGTATTTCAAGCATCAGCAATTCTTTATTTTGCATATGGAGGTTTTGAAAGTCTTGCAACAATGGCTGAAGAAACAAAAAATCCACCAAAGGATATACCAATAGGTTTGATTGGCTCAATGTCAGTAATCATAGTGATTTATTCTTTGATGGCACTTTCATTAAGCATGATGCAGAAATACACAGACATCGATACAGGTGCGGCTTTTTCAATTGCATTTCAGAAAGTAGGAATGAATTGGGCAAAATACGTCGTCGCTTTCGGTGCATTGAAGGGTATGACAACGGTTCTTTTAGTAGGAAGATTAGGACAGGCGCGTTACATCGTTCACATCGCGCGCTCGCATATGATTCCTCCTTGGTTTGCTCTTGTTCATCCCAAAACAGGAACACCTATAAACGCAACACTTCTGATTACACTTACAAGTGCTTGCGTAGCCTTTTTCACTAGCTTGGACGTGTTATCGAGTTTGATATCAGTAAGTACACTTTTCGTTTTCGTGTTGATATCGATTGCGCTTCTGGTAAGGCGGTACTATGTTAGAGGAGTTACAACGAAAGAGAATCAGTTAAAGCTAGTTATGTTTTTGATTCTCATTGTTGGTTCTTCAATGGGAACTTCAGCTTATTGGGGATTGAGGCCTAATGGTTGGATTGGATATACTGTTACTGTTCCTGTTTGGTTTTTTTCGACTATTGGGATGTCGGTTTTTTTGACTCAACAAAGGAAACCAAGATTTTGGGGAGTTCCACTTGTTCCATGGCTGCCATCTTTGTCAATTGCAACAACTGTTTTTCTCATGGGATCTTTGGAATATGAAGCTTTTGTAAGATTTGCAATATGCACTTTGGTTATGTTGGTTTACTATGTTTTCTTTGGTCTTCATTCAACTTATGATATGGCTCATCAACAAGAGAAGGTGCAAAATATCAATGTGAGTCACAAAGAGAGTGCTAGGATTGAAGGGCCTTAA 1776 0.4037 MASTKVNDDHEPQRSYWRWSKQDFFPEESFQSWHNYGSALSQTWLRFKDRVSTRSDDATESQELKKQSENEMKKCLNWWDLIWFGFGAVIGAGIFVLTGQEAHNHAGAAIVLSYVASGISAMLSVFCYTEFAVEVPAAGGSFAYLRIELGDFVAFIAAGNILLECVLGGAAVSRSWTSYFTSLLNRPKDSFRIKAHHLKDGYNLLDPIAVVVLLTAGTIAMISTRKTSLLNWIASAINTAVIIFVIIAGFLHADTSNLTPFLPYGARGVFQASAILYFAYGGFESLATMAEETKNPPKDIPIGLIGSMSVIIVIYSLMALSLSMMQKYTDIDTGAAFSIAFQKVGMNWAKYVVAFGALKGMTTVLLVGRLGQARYIVHIARSHMIPPWFALVHPKTGTPINATLLITLTSACVAFFTSLDVLSSLISVSTLFVFVLISIALLVRRYYVRGVTTKENQLKLVMFLILIVGSSMGTSAYWGLRPNGWIGYTVTVPVWFFSTIGMSVFLTQQRKPRFWGVPLVPWLPSLSIATTVFLMGSLEYEAFVRFAICTLVMLVYYVFFGLHSTYDMAHQQEKVQNINVSHKESARIEGP* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3416 591 Pfam Amino acid permease 76 458 IPR002293 GO:0016020|GO:0022857|GO:0055085
Psa1g3416 591 Gene3D Amino acid/polyamine transporter I 70 498 - -
Psa1g3416 591 Pfam C-terminus of AA_permease 515 564 IPR029485 -
Psa1g3416 591 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 12 578 - -
Psa1g3416 591 PIRSF AA_transporter 50 511 - -
Psa1g3416 591 PIRSF AA_transporter 481 586 - -
Psa1g3416 591 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3416 Psa-Chr1 298203745 298205520 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3416 13 572 Organic Solute Cotransporters AT2G34960 72.727 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3416 - - gmx:100797541 948.732