Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3414 ATGACATCCACTTTCACTTTCTTCCATTCTTGCATCATCTTCTTGTTCTATCTCTTCCTCTTAACTCCTTCACGTGCTTCTTCGTTTTCTGGAATTGAAACTGGAGATTTAGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGACGAGGCGGTGGCAAGACTTGTTGAGCTTGGAAAGGTCAGTGATGCTAGTGGCTATCTAGAGAGGACATTTTTGAGTCCTGCATCGATGAGGGCGATTGATCTTATTCAAACATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGATCAAATGGGAAATGTGCACGGTAGAGTTGAGGGTGCAAATGCAAATACAGAAGCTTTATTGGTTGGATCTCACTTGGACACTGTTGTTGATGCTGGTAAATTTGATGGATCACTAGGAATAATTTCTGCAATATCTGCATTAAAGGTTTTGCATGTCAATGAAAAGCTGCAAAACCTAAGGCGTCCTGTTGAGGTTATTGCATTTTGCGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGTAGTGGGGCTATAGCTGGTATTTTACCTGCTACGTCATTGGAGATATCTGATAAGAGAAATGTAATGATAAAAGATGTTCTTAAAGAGAACTCAATAGAACCTACCGAGGAAATGTTTTCGCAGCTCAAGTATGATCCAAAATCTGTTTGGGGTTATGTTGAGCTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTTCCACTTGGTGTCGTTAAAGGCATAGCTGGACAGACACGATTGAAAGTTACGGTTAAAGGCTCACAAGGTCATGCGGGAACTGTTCCAATGTCCATGCGCCAGGATCCTATGGTGGCCGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGCAAACATCCCGAAGAATACCTTTCTTTTGATGGTCATTGCACCGATTCGTCGATAAAATCACTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCAGGCCAGGCAAGCGATGAATTTCCAAAATGTTACATATACAGTGGATATACGAGCAATTGA 1089 0.416 MTSTFTFFHSCIIFLFYLFLLTPSRASSFSGIETGDLEKRGDLFPQILRDEAVARLVELGKVSDASGYLERTFLSPASMRAIDLIQTWMEDAGLRTWVDQMGNVHGRVEGANANTEALLVGSHLDTVVDAGKFDGSLGIISAISALKVLHVNEKLQNLRRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPATSLEISDKRNVMIKDVLKENSIEPTEEMFSQLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVKGSQGHAGTVPMSMRQDPMVAAAEQIVLMESLCKHPEEYLSFDGHCTDSSIKSLSSSLVCTVGEISTWPSASNVIPGQASDEFPKCYIYSGYTSN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3414 362 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 53 304 IPR010158 GO:0016813
Psa1g3414 362 SUPERFAMILY Bacterial exopeptidase dimerisation domain 259 347 IPR036264 -
Psa1g3414 362 Pfam Peptidase family M20/M25/M40 119 294 IPR002933 GO:0016787
Psa1g3414 362 PANTHER ALLANTOATE DEIMINASE-RELATED 41 346 - -
Psa1g3414 362 PANTHER ALLANTOATE DEIMINASE-RELATED 41 346 IPR010158 GO:0016813
Psa1g3414 362 SUPERFAMILY Zn-dependent exopeptidases 44 269 - -
Psa1g3414 362 Gene3D Zn peptidases 42 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3414 Psa-Chr1 298186083 298190335 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3414 K02083 - gmx:100819399 579.326