Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3401 ATGAGTAATACTACTATGACCGCTTCTACTGATCAATATTGGATGCAATTCTATCAGCAACCTCTCATGGATGATCATGCTATAGAAAATTTCTCTGATTCTACTGTTATGACAACAAATCCTCTTCCATTAGAAACCATGGTTTTGAGTCCAACAAACTCATACACAAACAACACTAGTGACCAATTGACACCAAAGGGTGGTAATGTATCCAAACCTATTAGAAGAAGATCTAGAGCTTCTAAGAGAACACCAACAACACTTCTCAATGCAAATACAACAAATTTCAGACAACTTGTGCAGCAATTCACAGGTTGTCCTAGCACTACTTCGTCGTCGATGTCGTTGTCGTCGCTAGGTGTTCATAAAGGACCTATTACCTTAAACTTTCAACAAGGTAGCAAACAGAATATTCAACATGATACATCAACAGCAACAGCTAGGTTAATGCCACAGTTTAGTAGCAGCACAGGTTACAATCAAGTTTCTAGGCCATTTCCATTGAAGATGGAACAAATTCAAGTGGCTCAGCAACTTCAGAATGGTTATAACTCGTTTGATTATGTCAAGAACAACGATTTTATTCCGAATTCGGCTTTGAATTGA 606 0.3795 MSNTTMTASTDQYWMQFYQQPLMDDHAIENFSDSTVMTTNPLPLETMVLSPTNSYTNNTSDQLTPKGGNVSKPIRRRSRASKRTPTTLLNANTTNFRQLVQQFTGCPSTTSSSMSLSSLGVHKGPITLNFQQGSKQNIQHDTSTATARLMPQFSSSTGYNQVSRPFPLKMEQIQVAQQLQNGYNSFDYVKNNDFIPNSALN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3401 201 MobiDBLite consensus disorder prediction 55 84 - -
Psa1g3401 201 PANTHER VQ MOTIF-CONTAINING PROTEIN 5 198 IPR039609 -
Psa1g3401 201 PANTHER VQ MOTIF PROTEIN 5 198 - -
Psa1g3401 201 Pfam VQ motif 83 109 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3401 Psa-Chr1 297704595 297705476 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3401 - - gmx:102669198 178.333