Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3276 ATGGAGATTGCAAATAGCATTGTGTTGACGAAGCCATTCACATTAAGAACCGATTCTGATTCTGATTCTGAGGAAAATTACAGTGCTCCCAATCTTTTACAGCGTATTTTAAGTCTTCTTAAGAATGTGCGGCCAGGATCTGATCTCGCACTTTTTCAGCTACCACCATTATTCAACTTCCCAAAGTCACAACTTCAATGCTATGGTGAATCTGTATATTCCACATCTTCAGATTTACTAAGCAAATGCAACACTGGAATAACTCCAATTGAGAGACTCATATCTGTTGTAACATGTAGCATATCGACCACGCGCCCTCCGATTTTCGGCCTCGCTCCTTACAATCCTGTTCTCGGAGAGACTCATCATGTTTCCAAGGGAAATCTCAATGTCCTACTAGAACAGGTTGCGCACCATCCTGCTGTTTCTGCTCTCCATGCAACGGATCAGAAGGAAAACGTCGAGATGATATGGTGTCAGTATCCTGTCGCGAAGTTTAATGGTACTTCGGTGGAGGCGCAGGTGCACGGGAAGAGGAGACTGAAGCTTCTTAATCATGGAGAGACATATGAAATGAATTCGCCAAATTTGTTTATAAGGATTCTTCCGGTTCCCGGAGTTGATTGGGTTGGGAATGTGGATATCAGTTGTGTAGAAACTGGTCTCGCGGCGGAGTTATGTTATATAAGTCAATCTTTCTTTGGATTTGGTGGAAGTAGAAGAGTCATAAAAGGGAAGATTATTGATTCATCGACGTCTAAGATTCTATATAAAGTTAATGGACATTGGGATAGTACTGTAACATTGAAGGATACAAATAATGGAGAAGAAAGGGTGATATATGATGCTAGAGAAGTCATTTCAAGACTTCAAACTCCGAGCGTTAAGGATGCAGAGAGTGTGTGGCAAACTGAATCAGCTCTGATATGGAGTAAGTTAAGCCAGGCCATCTTAAACAAAGACTGGGAAAAAGCAAGAGAAGCAAAGAAATGTGTGGAAGAAAAACAAAGGGAGGAATTGAGAGAAAGAGAGTCCAAAGGAGTAACTTGGGTTCCAAAACATTTCACTATTTCTCAAAGCAAAGAAGGGGATTGGGACTGTTTACCTATTCAAAAGTGGGTCCCGGACTCTCCTATCGTTACATTGTAA 1149 0.4143 MEIANSIVLTKPFTLRTDSDSDSEENYSAPNLLQRILSLLKNVRPGSDLALFQLPPLFNFPKSQLQCYGESVYSTSSDLLSKCNTGITPIERLISVVTCSISTTRPPIFGLAPYNPVLGETHHVSKGNLNVLLEQVAHHPAVSALHATDQKENVEMIWCQYPVAKFNGTSVEAQVHGKRRLKLLNHGETYEMNSPNLFIRILPVPGVDWVGNVDISCVETGLAAELCYISQSFFGFGGSRRVIKGKIIDSSTSKILYKVNGHWDSTVTLKDTNNGEERVIYDAREVISRLQTPSVKDAESVWQTESALIWSKLSQAILNKDWEKAREAKKCVEEKQREELRERESKGVTWVPKHFTISQSKEGDWDCLPIQKWVPDSPIVTL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3276 382 Pfam Oxysterol-binding protein 38 365 IPR000648 GO:0008289
Psa1g3276 382 Gene3D - 117 297 - -
Psa1g3276 382 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 380 IPR000648 GO:0008289
Psa1g3276 382 Gene3D - 302 373 - -
Psa1g3276 382 SUPERFAMILY Oxysterol-binding protein-like 34 368 IPR037239 -
Psa1g3276 382 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 4 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3276 Psa-Chr1 287281985 287289523 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3276 K22285 - gmx:100783943 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3276 1 287281985 287289523 Psa1g3276 1 287281985 287289523 ECH