Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3228 ATGTTCAGTTTCTTAACCGGAAAAGACGCTAGAAAGATTCTCAAGCGCAAAGATAGCGATGCTGGTGAAAAAGGAAGGGCTTTGGAAGACCTGAGGGCCTCTATCTTTAATCAATTTAATTTCTCCGACGGTGCAAAACGTCAACAGCGGCGTCTATGTGGTCCAGCTACTGCACTCACCTTCAATTTTGTGGTTGCAGTTGGTATTATTTTCGTAAACAAAATGGTGCTTCAAACTGTTAAATTCAAATTCCCTATACTTCTCACACTAATTCACTATGTAGTGAGCTGGTTTTTAATGGCAGTACTAAAAGCATTTTCTCTCCTTCCTCCATCTCCTTCCTCTAAATCAACTCGAATGTCAACTTTATTTACCCTTGGATTTGTTATGTCTCTATCTACTGGCTTCGCCAATGTTAGCTTGAAGTATAATAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTGACGCCATCAATAGTTTTTGCAGAATTCGTATTGTATAGGAAGAAAGTATCTCTGCCCAAGGTGTTAGCATTGACAGTGGTATCTGTTGGCGTTGCTGTGGCTACAGTGACGGATTTGCAATTCCATTTATTTGGTGCTTGTGTAGCGTTGGCATGGATTGTACCGAGTGCTGTAAATAAGATCCTTTGGTCAAGATTGCAGCAGCAAGAGAACTGGACAGCTTTGTCGCTGATGTGGAAAACGACACCTATTACATTGATTTTCCTTGCTGCCATGTTACCATGCTTAGACCCTCCAGGTGTACTCTCCTTTGATTGGAACTTGAGCAACACTTTGGTGATTTTCGGATCCGCCATTCTTGGATTCTTGCTGCAGTGGTCTGGTGCTTTAGCACTAGGAGCTACATCGGCCATTTCACACGTTGTCCTCGGGCAGTTTAAGACATGCGTCCTACTTCTAGGAAACTATTATCTCTTTGCATCTAATCCCGGCACAATCAGTATCTTCGGCGCATTCACAGCCATTGGCGGTATGTCTGTTTATACGTACCTTAATTTGAATCAGCAATCAAACAAAGGTTCTCCTCGACAAGCTTCCACCTTACCCAAATCAAAACTTGGCAAAGAAAATGGCAGCACCAATGGCAATGATGCACATTATGGTGCAGAGTCTGTCTAA 1146 0.425 MFSFLTGKDARKILKRKDSDAGEKGRALEDLRASIFNQFNFSDGAKRQQRRLCGPATALTFNFVVAVGIIFVNKMVLQTVKFKFPILLTLIHYVVSWFLMAVLKAFSLLPPSPSSKSTRMSTLFTLGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVFAEFVLYRKKVSLPKVLALTVVSVGVAVATVTDLQFHLFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPITLIFLAAMLPCLDPPGVLSFDWNLSNTLVIFGSAILGFLLQWSGALALGATSAISHVVLGQFKTCVLLLGNYYLFASNPGTISIFGAFTAIGGMSVYTYLNLNQQSNKGSPRQASTLPKSKLGKENGSTNGNDAHYGAESV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3228 381 MobiDBLite consensus disorder prediction 348 381 - -
Psa1g3228 381 PANTHER SOLUTE CARRIER FAMILY 35 15 356 - -
Psa1g3228 381 Pfam Triose-phosphate Transporter family 60 337 IPR004853 -
Psa1g3228 381 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 15 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3228 Psa-Chr1 284008709 284012369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3228 67 362 Organic Solute Cotransporters AT1G77610 25.407 1.46e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3228 - - gmx:100777499 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3228 1 284008709 284012369 Psa1g3228 1 284008709 284012369 ECH