Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3189 ATGGCTATGAGTTACCCTTTTCCAATATACTTCATTCTCTTAATAATAACCATACCACGTTTAATATCCACCGTTGGAAAAACCGAGCAATGGAAATCCTCACTACCAACAGAGTTATCCACAAACAACAACCTATCAGAAAAACTCATAAACGACCCAAAAGCCCTTGAAGAAGCTTCAACCGACTACGGCAACCTCGTACACGATTTCCCCGCAGCGGTGTTTCGTCCTACGACGGTGAGCGACATAGCAACCCTCGTTAAGCTGTCGTTCAACAGTTCTGTCCCGTTTCGTATAGCGGCAAGAGGACAGGGCCATTCCACGCGCGGACAAGCCATGGCTCGTGACGGCGTAGTCGTTGACATGAAAGGATTAAGAGAACGAGATCGTGAAGGGGTTAAGAATAATATAAAAATGAAAAATGTTAATGAGGGGATTAAGGTTTTTGGAGATTCTAAGGTTGGATACTATGTTGATGTTGGTGGGGAACAACTGTGGATTGATGTTTTATATGAAACACTTGAATATGGACTTGCACCTGTTTCTTGGACTGATTATCTTTACTTAACTGTTGGAGGAACACTCTCTAACGCTGGAATTAGTGGACAAACGGTTCATATCCAAGGATATGTTTTAGGTTTTAAAACTGGTATGGTGAAAAAGGCGAAGAAATGGTTTCATAAGGTGTCTATATCAATACTGTTATATGTACCGATCGCAACTGCAAAAACTTTATGA 738 0.4146 MAMSYPFPIYFILLIITIPRLISTVGKTEQWKSSLPTELSTNNNLSEKLINDPKALEEASTDYGNLVHDFPAAVFRPTTVSDIATLVKLSFNSSVPFRIAARGQGHSTRGQAMARDGVVVDMKGLRERDREGVKNNIKMKNVNEGIKVFGDSKVGYYVDVGGEQLWIDVLYETLEYGLAPVSWTDYLYLTVGGTLSNAGISGQTVHIQGYVLGFKTGMVKKAKKWFHKVSISILLYVPIATAKTL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3189 245 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 71 106 IPR006093 GO:0016491
Psa1g3189 245 PANTHER GULONOLACTONE OXIDASE 16 205 - -
Psa1g3189 245 Gene3D - 52 121 IPR016167 -
Psa1g3189 245 SUPERFAMILY FAD-binding/transporter-associated domain-like 47 205 IPR036318 GO:0050660
Psa1g3189 245 PANTHER CYTOKININ DEHYDROGENASE 3 16 205 - -
Psa1g3189 245 Pfam FAD binding domain 71 210 IPR006094 GO:0050660
Psa1g3189 245 Gene3D - 122 206 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3189 Psa-Chr1 280678216 280679246 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3189 K00279 - gmx:100782645 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3189 1 280678216 280679246 Psa1g3189 1 280678216 280679246 ECH
Psa4g0357 4 21553191 21554970 Psa1g3189 1 280678216 280679246 PCT