Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3181 ATGGAAGAAAACAATTCTCAATCCGAGTCTCCGAAATCAAAACCAGATCTAATCGATGCAGACTCAGAAATTCCCAATTCCAACAACAATGATACCTCGTTGGAAACAATTGTTCGGAGTTTCCAAGATTCAATGTCTGTAACCAAACAGCACAAATTCTGGGAAACTCAACCGGTTGGTCAATACAAAGATGCCGGAGACTCAACCTTACCTGAAGGACCGATTGAACCGCCAACACCTTTATCAGAAGTGAAACAAGAGCCTTATAATCTTCCAGCTGCTTATGAATGGACAACGTGTGACATGGATTCTGAAGAAACATGTGACGAGGTTTATCTTCTTCTGAAGAATAACTATGTTGAGGATGATGAGAATATGTTTAGGTTTAACTATTCCAAAGAGTTTCTTACATGGGCTCTGTGTGTTCCCGGTTATTACAAGAGTTGGCATATCGGGGTTCGCGCGAAAGGGTCGAAGAAATTGGTTGCTTTTATAACTGGTATTCCTGCTAGGATTAGGGTTAATGATAATGTTGTGAAAATGGCTGAGATTAATTTTTTATGTGTTCATAAGAAACTTAGGTCGAAGAGGCTTGCACCGGTTATGATTAAAGAAGTTACTAGGAGGGTTCATTTGGAGAATATTTGGCAAGCGGCTTATACGGCTGGGGTTGTTCTTCCGACCCCGGTTGCTACTTGTCAGTATTGGCATAGGTCGTTGAACCCTAAGAAGCTTATTGATGTTGGGTTTTCGAGGCTTGGTGCTAGGATGACAATGAGTCGAACTATTAAGCTTTATAAGTTGCCTGAGTCGACGGTGACTAGTGGATTTAGGAGAATGGAGCTGAGGGATGTACCGGCGGTTACGCGGTTGCTTAGGAATTATTTGGGACAGTTTGTTGTTGCGCCTGATTTTGATGAAAATGATGTTGAGCATTGGCTTCTTCCGCACGAAGATGTTGTGGATAGTTACTTGGTTGAGAGTCCTGAAAACCATGAAATCACTGATTTTTGTAGCTTTTACACATTACCTTCTTCTATCCTTGGGAATCAGAGTTACTCAACTTTGAAAGCTGCTTATTCTTACTATAATGTGGCTACTAAAACTCCACTGACTCAGTTGATGAACGATGCGCTGATTGTGGCAAAGCAGAAGGATTTCGATGTTTTCAATGCCTTGGATGTAATGCATAACGAAGGTTTCCTTAAAGATCTCAAATTTGGACCTGGAGATGGACAGCTTCACTACTACTTGTACAATTATAGGATTCGTAATGCCATGAAACCGTCCGAACTCGGGCTTGTGCTCTTGTAG 1314 0.4148 MEENNSQSESPKSKPDLIDADSEIPNSNNNDTSLETIVRSFQDSMSVTKQHKFWETQPVGQYKDAGDSTLPEGPIEPPTPLSEVKQEPYNLPAAYEWTTCDMDSEETCDEVYLLLKNNYVEDDENMFRFNYSKEFLTWALCVPGYYKSWHIGVRAKGSKKLVAFITGIPARIRVNDNVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPVATCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTVTSGFRRMELRDVPAVTRLLRNYLGQFVVAPDFDENDVEHWLLPHEDVVDSYLVESPENHEITDFCSFYTLPSSILGNQSYSTLKAAYSYYNVATKTPLTQLMNDALIVAKQKDFDVFNALDVMHNEGFLKDLKFGPGDGQLHYYLYNYRIRNAMKPSELGLVLL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3181 437 MobiDBLite consensus disorder prediction 22 37 - -
Psa1g3181 437 Gene3D - 42 437 - -
Psa1g3181 437 MobiDBLite consensus disorder prediction 1 37 - -
Psa1g3181 437 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 16 437 - -
Psa1g3181 437 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 235 437 IPR016181 -
Psa1g3181 437 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 74 233 IPR022676 GO:0004379
Psa1g3181 437 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 406 412 IPR022678 GO:0004379
Psa1g3181 437 MobiDBLite consensus disorder prediction 1 19 - -
Psa1g3181 437 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 48 234 IPR016181 -
Psa1g3181 437 PIRSF N-myristl_transf 2 437 IPR000903 GO:0004379|GO:0006499
Psa1g3181 437 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 183 191 IPR022678 GO:0004379
Psa1g3181 437 PANTHER N-MYRISTOYL TRANSFERASE 16 437 IPR000903 GO:0004379|GO:0006499
Psa1g3181 437 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 247 430 IPR022677 GO:0004379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3181 Psa-Chr1 280391209 280393743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g3181 1 437 Acyl Lipid Metabolism Gene Families AT5G57020 81.050 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3181 K00671 - gmx:100787291 792.341