Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3118 ATGGCTGCTTCGGAGGAGACTAGTGCATTGTTCCCAATATTTATATTGACAATAATGGCCATCCCTATAATTCCTTATACAATAACTAAGTTATGTCGTGCGGCTTCTAAGAAATCAAAGAGTATTCACTGTCAGTGTAATGACTGCTCAAAATCAGGGAAGTACCGCAAATCGATATTTAAGAGGATTTCGAGTGTTTCAACATATAGTAACTTGACGTTATTACTACTTTGGGTGGTTATGATTATTCTGGTTTATTACATAAAGAATAAGAATACTGAGGTTGAGGTTTTTGATCCATTTAGTATTCTTGGATTAGAGCCTGGCGCAGCAGAGTCTGCAATAAAGAAAAAATATAGGAGACTTTCTATTCAGTACCATCCAGATAAAAATCCAGATCCAGAGGCACACAAGTACTTTGTTGAGCATATTGCTAAGGCTTATCAAGCTCTGACTGATCCAGTAGCTCGTGAAAATTATGAAAAATACGGTCATCCTGATGGCAGACAGGGATTTCAAATGGGTATAGCTCTCCCTCAATTCCTGCTTAATATTGATGGGGCATCTGGTGGGATACTTTTGCTTTGGATTGTTGGTGTGTGCATTCTCTTGCCATTGGTCGTGGCTGTTGTCTATCTCTCGAGATCATCAAAGTATACTGGCAACTATGTGATGCATCAAACACTTTCCACTTACTATTACTTCATGAAGCCTTCTTTGGCCCCCAGCAAAGTCATGGATGTCTTCACAAAAGCTGCTGAATACATGGAAATTCCAGTTCGAAGGACCGATGATGAACCTCTTCAAAAGCTTTTTATGTTGGTAAGGAGTGAGTTGAATCTTGACCTCAAGAACATTAAACAGGAGCAAGCCAAGTTTTGGAAGCAACATCCTGCACTGGTTAAGACGGAGCTGTTAGTTCAAGCTCAGTTGACTCGTGAATTTGCAACCTTGTCTCCATCTTTAGCAAGTGATTTCAGACGGATTTTGGAAACAGCACCTCGCCTGCTTGAAGAGTTAATGAAGATGGCAGTTATACCACGCAATACTCAGGGACAAGGGTGGCTGAGACCTGCAATTGGTGTTGTTGAGCTTTCTCAATGTATCATCCAGGCTGTTCCTCTCAGTGCTAGAAAGACTACTGGTGGATCACCCGAAGGCATTGCACCATTTTTGCAGCTGCCACATATTAATGAGACTGTTGTTAAGAAGGTGGCCCGTAAGAAAGTAAGAACATTTCAGGAACTTTATGACATGGACTCACAGGAGCGAGCTGAGCTACTTACTCAAACAGCAGGGTTATCTTCTGATGAAGTGCAAGACGTTGAGATTGTACTGGATATGATGCCTTCCTTGACCCTTGACATAACTTGCGAGACTGAAGGAGAAGAGGGTATACAAGAAGGCGACATTGTTACTATCCATGCTTGGATTAATGTTAAAAGGGGTAACGGTCTGATTGCTGCCCTTCCCCATGCCCCATACTACCCATTTCACAAGGAAGAGAATTTCTGGTTTTTGCTTGCGGATTCTGTTTCGAACAATGTGTGGTTTTTTCAGAAGGTTAGTTTCATGGATGAAGGTGCTGCTGTAACGGCTGCTTCTAAGACAATTGCAGAATCTAAGGAGGGTTCCGGGGCAAGTCCGAAGGAGACCAGTAGGGCAGTTGCAGAAGCAGTGGATAAGGTGAAGGGGGGCTCTAGATTGGTAATGGGCAAGTTCCAGGCCCCATCTGAGGGTAACTATAATTTGACTTGCTATTGTTTGTGCGATTCTTGGTTGGGCTGTGACAGGAAGACTAATTTGAAGTTCAAAGTTTTGAAACGGACTCGGGCTGGCACTAGGGGCGCTGTTTTGGACGAGGGACCTATCATGGAGGATGGAGTTGAGGAGGAAGAGGACAATGAGGATGAAGAGTATGATGATGACTATGAGAGCGAGTATAGTGAAGATGAAGAAGATGATCAAAACTCAAAAAACAAGAATCAAGCTGCTAATGGAACTGGGAATAAAAAAGGCAAAGCTGTTGAAAGTTCAAGCTCTGATGAAGAATGA 2055 0.4258 MAASEETSALFPIFILTIMAIPIIPYTITKLCRAASKKSKSIHCQCNDCSKSGKYRKSIFKRISSVSTYSNLTLLLLWVVMIILVYYIKNKNTEVEVFDPFSILGLEPGAAESAIKKKYRRLSIQYHPDKNPDPEAHKYFVEHIAKAYQALTDPVARENYEKYGHPDGRQGFQMGIALPQFLLNIDGASGGILLLWIVGVCILLPLVVAVVYLSRSSKYTGNYVMHQTLSTYYYFMKPSLAPSKVMDVFTKAAEYMEIPVRRTDDEPLQKLFMLVRSELNLDLKNIKQEQAKFWKQHPALVKTELLVQAQLTREFATLSPSLASDFRRILETAPRLLEELMKMAVIPRNTQGQGWLRPAIGVVELSQCIIQAVPLSARKTTGGSPEGIAPFLQLPHINETVVKKVARKKVRTFQELYDMDSQERAELLTQTAGLSSDEVQDVEIVLDMMPSLTLDITCETEGEEGIQEGDIVTIHAWINVKRGNGLIAALPHAPYYPFHKEENFWFLLADSVSNNVWFFQKVSFMDEGAAVTAASKTIAESKEGSGASPKETSRAVAEAVDKVKGGSRLVMGKFQAPSEGNYNLTCYCLCDSWLGCDRKTNLKFKVLKRTRAGTRGAVLDEGPIMEDGVEEEEDNEDEEYDDDYESEYSEDEEDDQNSKNKNQAANGTGNKKGKAVESSSSDEE* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3118 684 MobiDBLite consensus disorder prediction 624 653 - -
Psa1g3118 684 Pfam DnaJ domain 99 161 IPR001623 -
Psa1g3118 684 Gene3D DnaJ domain 98 182 IPR036869 -
Psa1g3118 684 Gene3D C2 domain 453 613 IPR035892 -
Psa1g3118 684 SUPERFAMILY Sec63 N-terminal domain-like 243 450 - -
Psa1g3118 684 Gene3D - 389 448 - -
Psa1g3118 684 Gene3D - 218 373 - -
Psa1g3118 684 PANTHER DNAJ PROTEIN ERDJ2-LIKE 1 677 - -
Psa1g3118 684 SMART dnaj_3 98 156 IPR001623 -
Psa1g3118 684 MobiDBLite consensus disorder prediction 618 684 - -
Psa1g3118 684 SMART Sec63_2 209 604 IPR004179 -
Psa1g3118 684 PRINTS DnaJ domain signature 101 119 IPR001623 -
Psa1g3118 684 PRINTS DnaJ domain signature 119 134 IPR001623 -
Psa1g3118 684 PRINTS DnaJ domain signature 136 156 IPR001623 -
Psa1g3118 684 PRINTS DnaJ domain signature 156 175 IPR001623 -
Psa1g3118 684 MobiDBLite consensus disorder prediction 660 675 - -
Psa1g3118 684 ProSiteProfiles dnaJ domain profile. 99 164 IPR001623 -
Psa1g3118 684 PANTHER SEC63 DOMAIN-CONTAINING 1 677 - -
Psa1g3118 684 Pfam Sec63 Brl domain 222 602 IPR004179 -
Psa1g3118 684 SUPERFAMILY Chaperone J-domain 95 192 IPR036869 -
Psa1g3118 684 CDD DnaJ 99 153 IPR001623 -
Psa1g3118 684 SUPERFAMILY E set domains 454 608 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3118 Psa-Chr1 273012718 273017713 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3118 K09540 - gmx:100809969 1174.46