Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3048 ATGGCTTCCAATATGAATAATCTTCCTCTCACCACTAGAAACCATTGTGTAACACTGACATCAAGCTTGGTTCTAGCAGCTTTCGTTGCTCTCACAGTTCAAGTCTTCTACTTCTCCCCCATAGATCCACTTTTGTTTGAACCAACATCTTCTGCATCTTCATCCAAAAACAACCAATTACAGAATTTGATTAAACTTGGAGAAGGATTTTTGAAGCAACCAGAAGATGTTTGTGTGGATAAAGACGGTATCTTGTACACAGCTACACGAGATGGTTGGATTAAGAGATTGGTTAGGAATGGAAACTGGGAGAACTGGAAGCATATAGATAGTTCTTCTCTGCTTGGAATCACTACTGCTAAAGATGGTGGTCTCATTGTCTGTGATGCTACCTTGGGTTTGCTCAAGGTTACAGAAGAAGATGGTTTCAGTGTTATCCTTTCACAAGTTAATGGTTCTCAATTACTGTTTGCAGATGATGTAATAGAGGCATCAGATGGAAATATATATTTCAGTGTTGCCAGTACCAAATTTGGTTTGCACAATTGGCATCTTGATGTGCTTGAGGCAAGACCTCATGGAAAACTCTTAAAGTACAATCCTATGTCAAATGAAACCGTTATTGTTCTTGATGACTTGGCATTTGCAAATGGTGTTGCACTGTCTAAAGAAGAAGATTATGTTGTGGTTTGCGAAACTTGGAAGCTTAGGTGTGTGAGGCATTGGCTAAAAGGAATTAACAAAGGCAAGACAGATATCTTCATTGAAAACCTCCCTGGTGGACCTGACAATATCAATCTTGCTCCTGATGGCTCATTTTGGATCGCTTTGATTCAACAATTTAGTTATGAAAGACTGAGGTTTGTGCACACCTCTAAGGTGTCCAAGCACTTGGTAGCTTCATTCCCATGGCTATTTAATCTGATCAATGGAGCAGTGAAGTCAGCAATGGTGGTAAATGTTGGAGCTGAAGGCAATATTATCAGAAACTTTGGTGATAATGAAGGGAAGGTGATTAGTTTTTTAACTTCAGCTGTGGAGTTTGAGGACCATCTTTACCTAGGTAGTCTTAAAACTGACTTTGTTGGGAAATTTCCACTGTCAAGTCCAAACTAG 1116 0.3952 MASNMNNLPLTTRNHCVTLTSSLVLAAFVALTVQVFYFSPIDPLLFEPTSSASSSKNNQLQNLIKLGEGFLKQPEDVCVDKDGILYTATRDGWIKRLVRNGNWENWKHIDSSSLLGITTAKDGGLIVCDATLGLLKVTEEDGFSVILSQVNGSQLLFADDVIEASDGNIYFSVASTKFGLHNWHLDVLEARPHGKLLKYNPMSNETVIVLDDLAFANGVALSKEEDYVVVCETWKLRCVRHWLKGINKGKTDIFIENLPGGPDNINLAPDGSFWIALIQQFSYERLRFVHTSKVSKHLVASFPWLFNLINGAVKSAMVVNVGAEGNIIRNFGDNEGKVISFLTSAVEFEDHLYLGSLKTDFVGKFPLSSPN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3048 371 Pfam Strictosidine synthase-like, N-terminal 56 97 - -
Psa1g3048 371 Pfam Strictosidine synthase 163 245 IPR018119 GO:0009058|GO:0016844
Psa1g3048 371 Gene3D - 55 369 IPR011042 -
Psa1g3048 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 21 368 - -
Psa1g3048 371 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 21 368 - -
Psa1g3048 371 SUPERFAMILY Calcium-dependent phosphotriesterase 35 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3048 Psa-Chr1 265755742 265759575 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3048 - - mtr:MTR_2g042430 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3048 1 265755742 265759575 Psa1g3048 1 265755742 265759575 ECH