Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3035 ATGGTAGCCATGGCAACCACTAAGAGAATCGAAACCTACGAAGACTTCGCTAAAGTTCATGCAATTTTACTCGCCGCCTCAGGGTTGCCGGAGCCACTTCACCGCAGTCTCTTCCAAAAACTCTCCACCGAGACATTTGACGGCGGCGAACACTTCCAGATCGAACCTTGCGAAGAAAACCGCAAGAGACGCCTCGTGTTAACTTCGGATTCTATGGCCAAAGACTCCAACGTCTTCCTCATTGATCACGCTTGGACTTTCAGACTCCCTGACGCTTACAGACAGCTGCACGAAGTTCCGGGCTTAGCAGAGAGGATGAGTTCTTTGATGTGTGTGGATATCGACTCAAATTTAGATGGTGAAACTGAGGTGGATGACGTTGGTGATGAAGTTTCGAGAGACAAGCTTGATGTTGTGGAGGTAGTTGAGAGTGAGGTTCGAGAGGCAAAAGAGAAAGGTGATGGTACATTGAGATGGTTGGAGCTTGACGGTCTTGACATTGATGATGATACGCTTCTCTCACTGGACTTGCCTGCCAGATTTCCGGATTTAGTTGCGCTTAGCCTATATGGAAACAAGCTTACAAGAGCTGACTTGATTGTTAAGGAAGTTATCAAATTTAAACATCTCAAAGGACTCTGGCTGAACAATAATCCGGTTCTTAAAAATCATGATGGTGAGCTTGCAGATATTATTCTTAAGGAATTATCAGAACTGGAGGTTTATAATTCAACTTTCACGAGCAATTTTGGGGAGTGGGCGTTGGGCTTTTGTGCAGAGATATACGGAAAGGATAGCCCAACAAATGCTGATCAAGCTGACAGTCCACTGCTGAGTGTATCTAATCTTGACCTTTCAGATAGAAACATTCACAATTTGATCAACAAGGAATTTTCACCCATTTGTTTGCCATCCCTTTCGGACTTGAACATTCGTGGAAATCCATTGGAGCAAAACTCAGTTGCCAACTTGTTAGGTCTGCTGAGGGGATTCCCTTGCTTACGTTCATTGGAGGTTGATATTCCTGGTCCTCTTGGAGGAAGTGCCATTGAAATTCTAGAATCTCTTCCAAACATTTCTGAACTAAATGGTATTAGTACATCCAAAATATTGGAATCTAGAAAGCATGTTATTGATTCAGTGCTTCTTCCTCGCCTCCCTGAATGGATCCCTGACGAGCCTATTCATGACCGTATTATAAGTGCAATGTGGCAATATCTAATGACATATAGACTTGCGGATGAAGAAAAGTTAGACGAAACCTCTGTGTGGTATGTGATGGATGAATTCGGTTCTGCTTTGCGGCACAGTGATGAGCCAAATTTTAGAGTGGCGCCTTTTCTTTTTATGCCGGAGGGCAATCTAGCATCAGCCGTGAGCTATTCTATTCTATGGCCAACACAGAATGTTTGGAAAGGTGATGAATGCACTCGTGACTTTCTTCTTGGTATTGGTGAAGATAAACAACGCTCTGCAAGACTTACTGCCTGGTTCCATACGCCAGAGAACTATTTTATCCAAGAGTATGAGAAGCACAATCAGAAATTGCAATCCACAAGTTTATTACCACCCACTGTGCAGTCTTCTGAGAGTAAAAGTATCCGTCCGCATGATGGACGTCTCTTACGGGTTTACACAGATATACCTCACGTGGAGGAGTACTTGACACATCCTGATTTTGCAATCATAAAGGACCCAAAAGATGCAGATATAATATGGACATGTGTGCAGGTAGATGAGGAATTGAAGAAGGCCACAGGATTAACAGATCAGCAGTACATTAATCAATTTCCATTTGAGGCTTGTCTTGTCATGAAACATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACTCATCTGGGTCAACTTATTGGTGACTATAATGTACGCAAAAGAGAAGGACTAGACAACCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACAATTGATACTACTGTAACTGATAATTTATCGGCCATAATCCGACTAATGGAAACTGGTCCAAAAATATGCCAGAAGTATATTGAACAACCTGCTTTGTTCCAAGGGAAAAAGTTTGATCTCCGTTACGTAGTACTAGTTCGGAGCATGCAGCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTAAGGATAGCCAACAACCACTATTCTTTGGACAAAAGTAGTCTTTTTGAGTATGAAACTCATTTCACTGTTATGAATTATCGTGGAAGAATAAATCACAAGAATATTAAGGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAGTGGTTGGATATACATGCAAGAGTAAGGAATATGATTCGTTCAGTGTTTGAGGCAGCTGCGGTTGCACATCCTGAGATGCACAATCCAACATCAAGGGCAATTTACGGCGTAGATGTCATGTTAGACAGCTCTTTCCAACCTAAGTTACTAGAGGTAACTTACTGCCCTGATTGTACGCGAGCTTGCAAATATGATATGGATATCGTAGTTGGAGAAGGAGGGGTTGCCAAAGGTGTTGATTTCTTCAACAACGTGTTCAAGTGTCTCTTTTTGAATGAAATTTCTCAGGTTAGTCAATTGTAA 2622 0.4211 MVAMATTKRIETYEDFAKVHAILLAASGLPEPLHRSLFQKLSTETFDGGEHFQIEPCEENRKRRLVLTSDSMAKDSNVFLIDHAWTFRLPDAYRQLHEVPGLAERMSSLMCVDIDSNLDGETEVDDVGDEVSRDKLDVVEVVESEVREAKEKGDGTLRWLELDGLDIDDDTLLSLDLPARFPDLVALSLYGNKLTRADLIVKEVIKFKHLKGLWLNNNPVLKNHDGELADIILKELSELEVYNSTFTSNFGEWALGFCAEIYGKDSPTNADQADSPLLSVSNLDLSDRNIHNLINKEFSPICLPSLSDLNIRGNPLEQNSVANLLGLLRGFPCLRSLEVDIPGPLGGSAIEILESLPNISELNGISTSKILESRKHVIDSVLLPRLPEWIPDEPIHDRIISAMWQYLMTYRLADEEKLDETSVWYVMDEFGSALRHSDEPNFRVAPFLFMPEGNLASAVSYSILWPTQNVWKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFIQEYEKHNQKLQSTSLLPPTVQSSESKSIRPHDGRLLRVYTDIPHVEEYLTHPDFAIIKDPKDADIIWTCVQVDEELKKATGLTDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLGQLIGDYNVRKREGLDNLWILKPWNMARTIDTTVTDNLSAIIRLMETGPKICQKYIEQPALFQGKKFDLRYVVLVRSMQPLEIFLSDCFWVRIANNHYSLDKSSLFEYETHFTVMNYRGRINHKNIKDFVREFEEEHQVKWLDIHARVRNMIRSVFEAAAVAHPEMHNPTSRAIYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGVDFFNNVFKCLFLNEISQVSQL* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3035 873 Gene3D Ribonuclease Inhibitor 98 382 IPR032675 -
Psa1g3035 873 Gene3D - 665 850 - -
Psa1g3035 873 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 4 872 IPR027749 -
Psa1g3035 873 ProSiteProfiles TTL domain profile. 537 865 IPR004344 GO:0036211
Psa1g3035 873 Pfam Tubulin-tyrosine ligase family 591 841 IPR004344 GO:0036211
Psa1g3035 873 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 651 830 - -
Psa1g3035 873 SUPERFAMILY RNI-like 156 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3035 Psa-Chr1 264736743 264744433 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3035 K16609 - gmx:100809212 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3035 1 264736743 264744433 Psa1g3035 1 264736743 264744433 ECH