Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3020 ATGTCTGGAGTTACAAAGGAGGAAGAGTCGGGTAGTCCTAGTTGGGGTGCTTCGTTTTTTACTCAGACGACGGAAGATGTGGCTAAAGCCGTTGCTGCTGCAATGAATACTCCTAAGCCGTCAGTTATATATTCGTCGAGAAATGAACAGGGTGGTAGTCAACTTCAAAGGCTGCAGTATCAAGTTACGAAAATGATAAAAGGCTTTTCTCGTCCTCCTGAAGTTCAATATGCGAATTATAATCCGGAAATTTTGACGAGTCAGAAGCGTCAATGGGCTGCCAACTTTCATTTGCAGTACAATGATCATAAGTCTTGGAAGGAGCCGACTAAGTTGTTTGAAAGTATGGTGGTTGTTGGACTTCATCCTAATTCTGACATTCAGGCGCTGCAAAGGCAATATTTAGTGAGGAGGTCTGAAGGCTCTGGTAAATTGAGAAGTGCACTTGGTTATCAAAATCAATCCCGTGTGGAGCCCAATGTTGAACCTCAGGTCTTATTCGTTTATCCTCCAGACAAGCAGCTACCTCTTAAAGAAAAAGATCTTCTTTCTTTCTGTTTCCCTGGAGGTCTTGAGGTTAATGCTGTTGAGAAAACCCCTTCCATGAGTGAATTGAATAAAATTCATTTCGGGCAGGAACATCTTAAACAAAGGGATCTATCATTTGTATTTAGGTTACAGGGTGCTGATAATTCAACACTTTATGGGTGTTGCGTCTTAGTTGAAGAGATAGTGCATAAACCCTCTGGATTGCTTTCCATGATTTCGGATAAGCAGGCATCCAACTCTTCTTTGAGACGCCATATATTAACCACACAAAGATGTTACTGCATTCTCTCAAGGCTCCCTTTTTTTGAGTTGCACTTTGGTGTATTGAACAGCATCTTCATGCAAGAAAGGCTGGAGCGGTTGACAAAAAGTGTTGAGTATTTTAATGAATTTCCTGAAGGTAGTTATGACGGAGAAAACTTGGGAGGAAATTCAGAGCGTCTTTTGGTGAATGATAGGCTTACAGAAGACAAACTTGATGCGAATCCAAGAATTTCTCAATCAAACCTAAGCAATTCCCAACCCAAAAACATCGAGGATGATAGTAATCATCAAAAGAAACAAATGGTTAATGAGGAGATGCATACACTTAAGGAGGGAGCAGACGATGTCAATATTGTGCCTATTCATCCTGAAACTGACGGAGAAATTGTCAAAGAAGTGTCTGGCCTTACAATTTCTGAAGATAGTAATATGTATGGCAACGCCTTGGCAACAAACAAACAGCCAGAAGATAGGCGTTTACCAAATGCTATTTTGCCCCTCCTTCGGTATAGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGTTCACCTTGTGAAGATAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGAGGCTTCATTCTCAGGACAAGAAGATTTAAATGACTTTCCTGAGATTCTTGAATGGGCCAAGGCTAATAATTGTGGACCATTACAAATTATAAGTGAGTATTATCGTTTTAGTTGTCCTACAAGGGGATCGACACTTATCTTTCATCCTTTGGAGCACCTTCATTCCTTGGAATATCACAGGCCAGATGAGAACGCTCTTTATCTGTCTGGTTCACTTATTGGTTTGAATTCCTGTAGTACGGGTCTTAAATTAGCCGAGGCACAAAATTGTCTTCTGGTTGCAGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCGTGCTTATGTGGTACCTTAAGACTTGAACATGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATTGTAGTTGTGTGTTCTAATTTGGGAATTCTATCTGCGTCAATTCTATCAGTTATTCCACTCATCCGACCCTACCAATGGCAAAGCCTGCTAATGCCGGTTTTACCAAATGACATGCTTGACTTTCTGGACGCTCCTGTTCCTTACATAGTTGGTGTTAGGCACAAGACAAGTGAAGTTCAGTCAAAGTTAACCAATGTTATTCTGGTTGATGCCAACAGAAACCAGGTGAAGTCACCGTCACTACCTCAACTGCCAAGACAGAAAGAACTAATGTCTTCTTTACGTCCTTATCATGCAACCCTTGTAGGAGAAAGTTACTTAGGTAGGAAAAGGCCGGTGTATGAATGCACGGAAATGCAGATAGAAGCTGCCAAGGGATTGTTATCCGTCTTAAGGTCTTATCTGGATTCCCTTTGCAATAACATCCGTTCTCATACAATAACCAATGTACAATCGAATGACGATAAGGTATCCTTGCTTTTGAGGGAGAGTTTCATCGACTCATTCCCTTACCGTGACCAACCTTTCATGAAGCTATTCGTGGATACACAACTCTTCTCTGTACACACAGATCTTGTGCTCTCTTTCTTCCAAAAGGAATAG 2415 0.4128 MSGVTKEEESGSPSWGASFFTQTTEDVAKAVAAAMNTPKPSVIYSSRNEQGGSQLQRLQYQVTKMIKGFSRPPEVQYANYNPEILTSQKRQWAANFHLQYNDHKSWKEPTKLFESMVVVGLHPNSDIQALQRQYLVRRSEGSGKLRSALGYQNQSRVEPNVEPQVLFVYPPDKQLPLKEKDLLSFCFPGGLEVNAVEKTPSMSELNKIHFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEEIVHKPSGLLSMISDKQASNSSLRRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTKSVEYFNEFPEGSYDGENLGGNSERLLVNDRLTEDKLDANPRISQSNLSNSQPKNIEDDSNHQKKQMVNEEMHTLKEGADDVNIVPIHPETDGEIVKEVSGLTISEDSNMYGNALATNKQPEDRRLPNAILPLLRYSQYESSESSCSFQGSPCEDRNFRSDADDTETEEASFSGQEDLNDFPEILEWAKANNCGPLQIISEYYRFSCPTRGSTLIFHPLEHLHSLEYHRPDENALYLSGSLIGLNSCSTGLKLAEAQNCLLVAEEATALSIWAVACLCGTLRLEHVLTFFAGALLEKQIVVVCSNLGILSASILSVIPLIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVRHKTSEVQSKLTNVILVDANRNQVKSPSLPQLPRQKELMSSLRPYHATLVGESYLGRKRPVYECTEMQIEAAKGLLSVLRSYLDSLCNNIRSHTITNVQSNDDKVSLLLRESFIDSFPYRDQPFMKLFVDTQLFSVHTDLVLSFFQKE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3020 804 ProSiteProfiles Tripartite DENN domain profile. 147 804 IPR037516 -
Psa1g3020 804 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 804 - -
Psa1g3020 804 Gene3D - 575 747 IPR043153 -
Psa1g3020 804 SMART uDENN_cls 109 242 IPR005113 -
Psa1g3020 804 SMART DENN_cls 271 678 IPR001194 -
Psa1g3020 804 Pfam uDENN domain 163 240 IPR005113 -
Psa1g3020 804 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 804 - -
Psa1g3020 804 Pfam DENN (AEX-3) domain 562 676 IPR001194 -
Psa1g3020 804 MobiDBLite consensus disorder prediction 344 361 - -
Psa1g3020 804 MobiDBLite consensus disorder prediction 343 368 - -
Psa1g3020 804 MobiDBLite consensus disorder prediction 451 479 - -
Psa1g3020 804 Gene3D - 102 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3020 Psa-Chr1 264364827 264376867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3020 - - gmx:100782148 1306.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g3020 1 264364827 264376867 Psa1g3020 1 264364827 264376867 ECH