Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g3010 ATGCCCCACCGTGCCTCATCGCCACCGTTAATCAGCCTCCCACTCCTCATCATTCTTTTACCTATCCTCACCTTAACCCTCCTCTTCCTCGCCGTACCTCCGCTTCTCTCCGCCGCCACCAACATCCTCCAACACTCCCCCGTTAAAACCACCTGGAACTCCTTCAACATTATCCTCGTCTTTGTCGCCATCCTGTTCGGCGTTTTCGCTAGACGAAACGAAGACGAATCGTCACCGCAGCAAAGCCCCACCGATGCTGTTCCCGATCAAAACATTGCCTTCCGAAGAGTTTCGGTATCGTCTCATGGAGTTGAAACTGGTGGCTATGAATCGCAGCAATGGTTTGGATTCTCTAGTGACGAAACTCCGAACCGGTTGCAGTCGCCGGTTACCGGTGTTAACCGGTTGAGAAGAAGTAGTAGTTCTTACCCAGATCTACGCCAGATGGAAACCGATGATTCCCGTTATAAGTTTCGGTTTTTCGATGATTTCGAAATCGAGAAACAGTTCCGTTCGCCGTCTAGGGCAGCATTTTCCACACCGCACCACCGCAAACAGTTGCCGGAATATCGAAGTCAAGAAGAAGAGCAAGTACATGTTAAGGAAATTCCTGTAGATACGTTCCAAACTCGTCCTTCTCCGGTGAAGTTATCCTCACCTTCTCCGCCACCACCTCCTCCACCTATTTCTCGGCGTCGTCAATCACAGAGTATGCATCAGACAGTAGAGAGTAGGAGCGAGATAACGGAGCTTGAAGATCCTGAGTTCACAAGGATCGATTCTCCGCCACCGACACCTCCGCGCCCGTCGGCGAAAACACGATCGGAGCAGAAGCACGGAAAGAATGAGCGAAGAAAAAGTAATGTGAAGAGAGAGATAGCAATGGTTTGGGCTTCGGTACTTTCCAATCAGAGAAAGCGAAAGAAGAAAGAGAGACCAAGAAACGATCATAATCACCATTACGATAATGTTGATGAATTAACAAAAAATGCAACAGCGCCACCGGTGACTCCACCGCCACCTCCTCCGCTGCCTCCACCTTCAGTTTTTCACAGTATATTTAGAAAGGGAATGGGAAAGAGTAAGAAAATCCATTCAGTCCCAGCGCCGCCTCCTCCTCCTCCTCCGTCAAGAAGATCGGCTAAGCCAAAGAATCAAATCCCCCAGCCTCCACTGTCTTCTCCACCGTCAAGGAGATCTTCTAAGCCTCTGAATCAAATCCCCCTGCCTCCGCCGACGCCACCTCGCCAGGGAAACCGCACGAAACCGCCATTGCCAAACAAATCGACCAACTTTATGAATGACACTTTAAACGTCGGCAACCAGTCGCCTCTGATTCCCATTCCACCACCTTTACCACCGTTCAAGATTCCTGCAATGAAGTTCGAACTTCACGGGGATTTTGTTAAGATACTAAGTAACCAGAGCTCGCGATGTACTTCGCCGGAGCGGGAGCACATTGATGGGGAAGTTTCAGAAACCACCACATTTACCAACTCTGTTACGAATCATAAGAACGACGGGAAAGCCTACGTTTTCTGTCCAAGCCCTGACGTGAACGCGAAGGCCGCAACATTCATTGCTCGACTCAGGGGAGAATGGAGGCTACAAAAGCTCAACTCCATCAAGGAGAAAGGCAATGGCTCATTGCCTCTTGCAAGTGATTTGTTACACTAA 1677 0.4967 MPHRASSPPLISLPLLIILLPILTLTLLFLAVPPLLSAATNILQHSPVKTTWNSFNIILVFVAILFGVFARRNEDESSPQQSPTDAVPDQNIAFRRVSVSSHGVETGGYESQQWFGFSSDETPNRLQSPVTGVNRLRRSSSSYPDLRQMETDDSRYKFRFFDDFEIEKQFRSPSRAAFSTPHHRKQLPEYRSQEEEQVHVKEIPVDTFQTRPSPVKLSSPSPPPPPPPISRRRQSQSMHQTVESRSEITELEDPEFTRIDSPPPTPPRPSAKTRSEQKHGKNERRKSNVKREIAMVWASVLSNQRKRKKKERPRNDHNHHYDNVDELTKNATAPPVTPPPPPPLPPPSVFHSIFRKGMGKSKKIHSVPAPPPPPPPSRRSAKPKNQIPQPPLSSPPSRRSSKPLNQIPLPPPTPPRQGNRTKPPLPNKSTNFMNDTLNVGNQSPLIPIPPPLPPFKIPAMKFELHGDFVKILSNQSSRCTSPEREHIDGEVSETTTFTNSVTNHKNDGKAYVFCPSPDVNAKAATFIARLRGEWRLQKLNSIKEKGNGSLPLASDLLH* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g3010 558 MobiDBLite consensus disorder prediction 366 381 - -
Psa1g3010 558 PANTHER COTTON FIBER (DUF761) 4 545 - -
Psa1g3010 558 MobiDBLite consensus disorder prediction 333 349 - -
Psa1g3010 558 MobiDBLite consensus disorder prediction 272 291 - -
Psa1g3010 558 MobiDBLite consensus disorder prediction 182 202 - -
Psa1g3010 558 MobiDBLite consensus disorder prediction 216 231 - -
Psa1g3010 558 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 4 545 - -
Psa1g3010 558 MobiDBLite consensus disorder prediction 172 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g3010 Psa-Chr1 264007161 264009720 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g3010 - - mtr:MTR_2g040580 561.992