Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2982 ATGATTTTGAGAGCAAGAAGCTTCAACAAAAGAGAACCAGAAGCTACCACAAGAAACATTTCAACTAGGTTAGAGGATTATAGACCAGAACATGTGACCCTGGAAACAAATGTTGAGGAAAAATTGCACCAAAAAGCTGTTCCTTTGCTTTCTTTGCCTAAAGAAGTTGTTTTCTCTTCTCCAAGACCAGTTTCTGAGCTTGATGCTGCAGCAACTAAGGTTCAGAAAGTTTATAAGAGTTATAGAACTAGAAGAAACCTTGCTGATTCATTGGATTCTGCTGCACTTGAAAGAAGTTCAGTTTCATTTTTTGATGAACAAAAACAAGAAACTGCAGTGTCAAGATGGGGAAGAGCAAGAACAAGAGCAGCTAAGGTTGGAAAAGGTTTGTCAAAAGATGATAAGGCACAAAAATTAGCACTTCAACATTGGCTTGAAGCTATTGACCCACGTCATCGATATGGACACAATTTGCATTTATATTATGATATTTGGTTTGCAAGCCTAAGCACTCAACCATTTTTCTATTGGTTGGATGTTGGAGATGGTAAAGAAATAAATCTTGAGAAATGTCCAAGGGCTACCTTACAACGTCAGTCCATTAAATATCTTGGACCAAAAGAGAGGGAAGAATATGAAGTATCTGTTGAAAATGGGAAGTTGGTGTATAGACATGGTGGGAAGTTTGTGGATACAGATGAAAAGTCAAAATGGATATTTGTTCTTAGCACCACTAGGGCTTTGTATGTTGGAAGGAAACAAAAGGGTGCTTTTCAACACTCTAGCTTTTTATCTGGGGCTGCAACCACAGCTGCTGGAAGATTAGTTGCACGACAAGGTGTACTAGAGGCAATTTGGCCTTATAGTGGTCATTATCACCCAACTGAAGAGAATTTCAGAGAATTTGTTAGCTTTCTTGAGGAGCACAATGTAGATCTCTCTAATGTCAAGAGATATGCTATAGATGATGATGCTCCTTCATTTATTGGCACTAATGAGCCCCAACAAATTATGGGTCCTACTCAAACTTCCCAATCAATATCTACCAAAAATATCACCAACAAAGGAACCAAAATCAACAAAGCAACAGAGGTTAAAGACAAGAAATTGGAGGGGCCAATATTTGACTCTTCCAAGAGATTATCATGCAAGTGGTCCACAGGAGCTGGAGCTCGTATTGGCTGTGTGCGTGACTATCCTGAGCACCTTCAATCAAGGGCATTGGAGCAAGTTAATTTGTCTCCTAGGCCTGCTTCTGCAAGACCATATAAGTATGGCCCTATACCTTCTCCAAGACCAAGCCCAAAAGTTAGGATCTCTCCTAGGCTTGCTTACATGGGGTTACCTAGCCCTAGAACCTCAATTCAAGTTGCAAATTGA 1380 0.3986 MILRARSFNKREPEATTRNISTRLEDYRPEHVTLETNVEEKLHQKAVPLLSLPKEVVFSSPRPVSELDAAATKVQKVYKSYRTRRNLADSLDSAALERSSVSFFDEQKQETAVSRWGRARTRAAKVGKGLSKDDKAQKLALQHWLEAIDPRHRYGHNLHLYYDIWFASLSTQPFFYWLDVGDGKEINLEKCPRATLQRQSIKYLGPKEREEYEVSVENGKLVYRHGGKFVDTDEKSKWIFVLSTTRALYVGRKQKGAFQHSSFLSGAATTAAGRLVARQGVLEAIWPYSGHYHPTEENFREFVSFLEEHNVDLSNVKRYAIDDDAPSFIGTNEPQQIMGPTQTSQSISTKNITNKGTKINKATEVKDKKLEGPIFDSSKRLSCKWSTGAGARIGCVRDYPEHLQSRALEQVNLSPRPASARPYKYGPIPSPRPSPKVRISPRLAYMGLPSPRTSIQVAN* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2982 459 ProSiteProfiles IQ motif profile. 67 95 IPR000048 GO:0005515
Psa1g2982 459 MobiDBLite consensus disorder prediction 1 20 - -
Psa1g2982 459 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 19 458 IPR044159 -
Psa1g2982 459 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM5 19 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2982 Psa-Chr1 262423580 262425850 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2982 - - gmx:100784098 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g2982 1 262423580 262425850 Psa1g2982 1 262423580 262425850 ECH