Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2870 ATGTCATCATCATCAACACTGATTCTGAAAGATGAATTGGATATCGTGATTCCAACAATAAGGAATCTCGATTTCTTGGAAGACTGGAGACCATTCTTCCAACCATATCATCTCATCATCATACAAGATGGTGATCCTTCTAAAGTCATCAAAGTCCCTCAAGGCTTTGATTATGAGCTTTATAACCGTAACGATATTAACCGTATTTTGGGTCCTAAAGCTTCTTGTATTTCATTCAGAGACTCTTCTTGTCGTTGCTTTGCTTTCGCTTTATCCAAAAAGAAATACATCTTTACCATTGATGATGACTGCTTTGTTGCCGAAGATCCATCTGGCAAAAGAGTTAATGCCGTGCAGCAGCATCTTAAGAACTTGCTGACTCCATCAACCCCATTTTTCTTCAACACTCTGTATGATCCATATAGAGAAGGTGCGGATTTTGTCCGTGGATATCCGTTCAGTCTTCGTGAAGGTGTTCCAACAGCAGTCTCTCATGGACTATGGCTAAACGTTCCTGATTATGATGCTCCAACTCAGCTTGTCAAGCCTCTCGAAAGAAACACTAGGTATGTAGATGCTGTTATGACAATACCAAAGGGAACTCTCTTTCCCATGTGTGGTATGAATTTGGCGTTCAACCGTGAATTGATTGGTCCTGCTTTGTATTTTGGACTCATGGGTGCTGGCCAACCTATTAGTCGCTATGATGATATGTGGGCTGGCTGGTGTGTGAAGGTGATAAGTGACCATTTGGGTCTGGGAGTGAAGACTGGTTTGCCTTATCTGAGGCACAACAAAGCTAGTAACCCATTTGTGAACCTCAAGTTAGAGTACAAAGGAATATTCTGGCAGGAAGAGTTGATACCATTTTTCCAATCTGTTACTTTTCCAAAGGAATGCACAACTCCTCAGCAATGCTATCTTGAACTCTCCAAAATGGTTAAAGAAAAGCTTGGATTGATTGATGATTATTTCATCAAGCTAGCTGATGCTATGGTTACTTGGATTGAAGTTTGGGATGAGCTTAACCCTTCTGAGGAAAAAACTGTTGCATTGCCTAATGATTCAAGAAAATAG 1077 0.4067 MSSSSTLILKDELDIVIPTIRNLDFLEDWRPFFQPYHLIIIQDGDPSKVIKVPQGFDYELYNRNDINRILGPKASCISFRDSSCRCFAFALSKKKYIFTIDDDCFVAEDPSGKRVNAVQQHLKNLLTPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNVPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPALYFGLMGAGQPISRYDDMWAGWCVKVISDHLGLGVKTGLPYLRHNKASNPFVNLKLEYKGIFWQEELIPFFQSVTFPKECTTPQQCYLELSKMVKEKLGLIDDYFIKLADAMVTWIEVWDELNPSEEKTVALPNDSRK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2870 358 SUPERFAMILY Nucleotide-diphospho-sugar transferases 13 217 IPR029044 -
Psa1g2870 358 PANTHER UDP-ARABINOSE MUTASE 3 351 IPR037595 -
Psa1g2870 358 PIRSF UPTG 3 347 IPR004901 GO:0016866|GO:0071669
Psa1g2870 358 Pfam Reversibly glycosylated polypeptide 9 343 IPR037595 -
Psa1g2870 358 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2870 Psa-Chr1 253590577 253592299 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2870 K13379 - gmx:100816315 655.21