Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2864 ATGGCAGACACCAACGAGAAGGAAATCCAAATCCGAACCCTAACCGGCGAGTCTATCACTCTTCACATCACTCCCACTGCCACCGTCCAACACCTCAAGCTTCTACTCAACCACTCTTTCTCTCCCGCCACCAATTCCCCCAATTTCCATCTCTTTTTCAAGGGTAATAAATTGCAATTGCACGATGAAGTTGGTTCTTATCTCATACAAGCCGGTGAGTTTCTCGTTTTGATTCCATTCTCCAAGAAGGAACCGACTTCAACAGAGAAACCAAATTCAGCTTTCTCTTCTCCAAATGTTGCTTGCAATGCTAAAACATCGAATCTTGCGGATGCGACATGGTCCAATATAATGGAAGATTTGTCAGAATTACGCGAAACTACTCCAGAAATTGACCATAATAATGTATCTAATTTTGAAAGGAATAAAGAGAAAACTGTGGAGGCTGAAAAGGGGATAGAGCTTCCTTATCATCTCATATTGAATACATTGGATTTGGATTGTACTAACCAGAGTGCTCTTGGAGAGTGTAGTTGTGAGGTTTTTTCGAAGCTTTTGGACTCGGTGAATTGTTTATCTGATTTGGCCCTTGGACATTGCAAGTTGTTCAAGAGGGCATGTTTGAAGGGATTTCGTGGCAATGATGGTGGTGGGGTCACTTGCTTGTGTCCACCGTGGTTGAAGATAGTTGTGAAGTCGTTTGCTTTCATGAATATCGTTTCTGCCTTTCTTCATTTGCAGGGTAGGAAGGTAACCACGGGTCTACTAGAAGAAGCACTTGGTCAGCTTGCTAAGTTTGGAGTCAAACTTGGCCTCCATGACATGAAGCATCTCTCCCTTCTTTGTCCTCATCTAGTTTGTTTTGTAGATGACATAGAGAAGGCAAGTTTTGGCGATGTCATTGTTGTAGTAAATCATTCAAGTAACAATGAAGATCAAATTGAAGATAATCTGAAAAGAGCTCGCAAGTCGCTCTATGTTTCAAAGATTGTCAGTACATTAAAGAGAAGGGACTGTTCTTTCCGAAAATATCTGGGGTGGGGTTTTGAACAGCTTCAGATTGAAATTGGAGATGAGATGAACGTGAGAATTTCCTTTGAAGAACTGCTTGCAGCAGTCAAGGACTGTGATTTTACCAGGAAAGAAAACAAATCAAAACGTGTAAAGAGAAGCTCAACTTCCTCAAGACCTGACATGGACCGCACTGGGTGTCATGACACAAGGTCATTAATGGCTGCGGACATGGTTGAACATCTTAAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATGTTGAAGATATATGTGCCAGAAAAGCCATTTACAGTGAGATCCCCGCCGAATTATCTGAAAAAATGAGATCTGCACTAGATTATATTGGAGTTTCCAAATTGTATAGTCATCAGGCAGAGTCTATTCAAGCCTCCCTTGCCGGGAAGAATGTTGTTGTGGCTACAATGACATCAAGTGGCAAATCTGTTTGCTACAACCTGCCTGTTCTAGAAGAGTTGCTCAAGAATTCATCCTCATGTGCGTTGTACATATTTCCAACAAAGGCATTAGCTCAAGATCAACTAAGGTCTTTGTTACACATGACAAAAGAATTTGATGCCGACTTAAATATTGGTATATATGATGGTGACACTTCTCATAGCGAAAGGACATGGCTACGTGATAACTCTAGACTGTTAATCACAAATCCAGATATGCTACACATATCAATCTTGCCCCACCATCGGCTATTTGGCCGGATTTTATCAAATCTAAGGTTTCTGGTAATTGATGAAACTCATACCTACAAGGGAGCATTTGGATGTCATACTGCTCTTATATTAAGGAGGCTTAGGCGACTCTGCTCACATGTATATGGAGCTGTTCCTTCTTTTATATTCTCTACAGCTACTTCTGCGAATCCTCATGAGCATTCTATGGAACTTGCAAATTTATCCAAAGTGGAGTTATTTCAGAAAGATGGAAGTCCATCTGCAAGAAAACTTTTCATCCTTTGGAATCCTGCTTTGCGACCAAAAGCTATATTCAATAAAGCTCGCTTTTCTATGGATAATGATGAGTTGGCAGATGAAAGTATAAATTTTGTTCGTTCAAGCCCTATTGTGGATGTTTCACGCCTTCTTGCTGAAATGGTTCAGCATGGTCTTCGCTGCATTGCATTTTGTAAATCACGGAAGCTTTGTGAGCTTGTTTTATCCTATGCGCGTGAGATTCTTCATGAGACAGCCCCGCATCTACTGGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGAGTGCTTTATTTAGTGGTAAAATTTACGGCGTTGCTGCGACCAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGATGTCACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGGAGAGATAGACCATCTCTTGCTATATATGTTGCATTTGGTGGACCGCTTGATCAATACTTCATGAAAAATCCTCGAAAACTTTTTGAAAGACCAATCGAATGCTGTCATATTGATACTCAAAACAAGCAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTCATGAACACCCTCTGAGTGTGCAGTATGATGAGGAGTATTTTGGTGCTTGCTTAGAGAGTGTTTTGAATTCTCTAAAAGATAGAGGATATTTATGTCCTGATCTGTCTGATTCTTCTAGAATTTGGAACTACATTGGTCCTGAGAAATTACCTTCACAAGCAGTCAATATCCGAGCAATAGAAACTGTTAGGTACAGTGTCATAGATCAGAAAAAGAATGAAGTCCTAGAAGAGATAGAGGAAAGCAAGGCTTTCTTTCAGGTTTACGAAGGTGCAGTGTACTTGCGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAACTGCTTTCTGTAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGTGATTACACCGATATCCATGTCATTGGGGGTAATATTGCGTATCCAGTAATTGATTCCATCATGTTTCCAAAAACAAATGTGCGTGCTAATGTATGTCAAGTGACAACTACTTGGTTTGGATTTTATCGTATTCGGAAAGGAAGCAATCAAATCATTGATGCTGTTGATCTAGCACTTCCTCAGTACTCATACAAGTCACAGGCAGTCTGGGTTCCTGTGCCACAATCAATAAAAGAAGCAGTGGCCAAGCAAAATTATGATTTCCGTGGAGGTTTGCATGCTGCTTCTCATGCTGTTTTACACGTAGTGCCTTTACATATAATGTGCAACTTGTCTGATTTGGCTCCTGAGTGTCCGAATCCTCATGACAGCCGATATTATCCTGAAAGAATCTTAATATATGATCAACATCCTGGAGGGTCTGGAATTTCAGTACAGGCTCAACCTCACTTCACAAAGTTCCTGGCAGCTGCTCTAGAAGTGCTCACATGTTGCCGCTGTTCGGCCGAAGTAGGTTGCCCTAATTGTATTCAGAGCTTTGCTTGTCATGAGTATAACGAGGTTTTGCACAAGGATGCGGCCATTATGATCATCAAGGGTATTCTAGATGCAGAGAACTAG 3621 0.4112 MADTNEKEIQIRTLTGESITLHITPTATVQHLKLLLNHSFSPATNSPNFHLFFKGNKLQLHDEVGSYLIQAGEFLVLIPFSKKEPTSTEKPNSAFSSPNVACNAKTSNLADATWSNIMEDLSELRETTPEIDHNNVSNFERNKEKTVEAEKGIELPYHLILNTLDLDCTNQSALGECSCEVFSKLLDSVNCLSDLALGHCKLFKRACLKGFRGNDGGGVTCLCPPWLKIVVKSFAFMNIVSAFLHLQGRKVTTGLLEEALGQLAKFGVKLGLHDMKHLSLLCPHLVCFVDDIEKASFGDVIVVVNHSSNNEDQIEDNLKRARKSLYVSKIVSTLKRRDCSFRKYLGWGFEQLQIEIGDEMNVRISFEELLAAVKDCDFTRKENKSKRVKRSSTSSRPDMDRTGCHDTRSLMAADMVEHLKKGIGSEGQIVHVEDICARKAIYSEIPAELSEKMRSALDYIGVSKLYSHQAESIQASLAGKNVVVATMTSSGKSVCYNLPVLEELLKNSSSCALYIFPTKALAQDQLRSLLHMTKEFDADLNIGIYDGDTSHSERTWLRDNSRLLITNPDMLHISILPHHRLFGRILSNLRFLVIDETHTYKGAFGCHTALILRRLRRLCSHVYGAVPSFIFSTATSANPHEHSMELANLSKVELFQKDGSPSARKLFILWNPALRPKAIFNKARFSMDNDELADESINFVRSSPIVDVSRLLAEMVQHGLRCIAFCKSRKLCELVLSYAREILHETAPHLLDSICAYRGGYIAEERRKIESALFSGKIYGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAIYVAFGGPLDQYFMKNPRKLFERPIECCHIDTQNKQVLEQHLVCAAHEHPLSVQYDEEYFGACLESVLNSLKDRGYLCPDLSDSSRIWNYIGPEKLPSQAVNIRAIETVRYSVIDQKKNEVLEEIEESKAFFQVYEGAVYLRQGKTYLVEKLDLSSKTAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVIDSIMFPKTNVRANVCQVTTTWFGFYRIRKGSNQIIDAVDLALPQYSYKSQAVWVPVPQSIKEAVAKQNYDFRGGLHAASHAVLHVVPLHIMCNLSDLAPECPNPHDSRYYPERILIYDQHPGGSGISVQAQPHFTKFLAAALEVLTCCRCSAEVGCPNCIQSFACHEYNEVLHKDAAIMIIKGILDAEN* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2864 1206 PANTHER ATP-DEPENDENT HELICASE HRQ1 21 1205 - -
Psa1g2864 1206 ProSiteProfiles Ubiquitin domain profile. 7 78 IPR000626 GO:0005515
Psa1g2864 1206 SMART ultradead3 461 667 IPR014001 -
Psa1g2864 1206 CDD Ubl_ubiquitin_like 9 78 - -
Psa1g2864 1206 Pfam Ubiquitin family 9 77 IPR000626 GO:0005515
Psa1g2864 1206 Pfam Helicase conserved C-terminal domain 711 820 IPR001650 -
Psa1g2864 1206 Gene3D - 437 657 IPR027417 -
Psa1g2864 1206 Gene3D - 8 96 - -
Psa1g2864 1206 Gene3D - 700 882 IPR027417 -
Psa1g2864 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 829 IPR027417 -
Psa1g2864 1206 Pfam MrfA Zn-binding domain 1095 1177 IPR018973 -
Psa1g2864 1206 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 473 654 IPR014001 -
Psa1g2864 1206 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 707 865 IPR001650 -
Psa1g2864 1206 SMART helicmild6 741 822 IPR001650 -
Psa1g2864 1206 CDD SF2_C_Hrq 667 831 - -
Psa1g2864 1206 Pfam DEAD/DEAH box helicase 467 636 IPR011545 GO:0003676|GO:0005524
Psa1g2864 1206 SUPERFAMILY Ubiquitin-like 8 93 IPR029071 -
Psa1g2864 1206 CDD DEXHc_Hrq1-like 465 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2864 Psa-Chr1 252016543 252061438 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2864 - - cam:101511069 2062.34