Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2832 ATGAAGGAGCCGTTGTTGTGGGGAAGAGAAGACAAGAGTAGGAGCAAAAGAGGGAAAGTGATTTGGGAAGGGTTGATGATGATGAGTAAGAATAAGGTTGAGAAGTTGAAGAATACGGTGACGGTGAGGTCTTCCAGGATGAACTTGTGGATGATACGAGCTACCACGTCGGTGATATTGTGGATTTGCATTGTTCAGTTAACTGCATTTGGTGATATGTGGGGTCCTAGAGTTTTGAAAGGTTGGCCTTCGTGTTTTACTCAAGAATCTGCAATCGTTGAGTTTCCGACTGCTCTGCCCAGGGTTCTTCCACCCAAGAGGGTTTATAAAAACAATGGTTACTTGATGGTGTCTTGCAATGGAGGATTGAATCAAATGAGAGCGGCGATATGTGATATGGTGGCAATTGCAAGATATTTGAATGTCACGCTAATAGTCCCTGAATTGGATAAAGCATCCTTTTGGGCTGACCCCAGTGAGTTCCAAGATATATTTGATTTGGATCATTTTATTACATCCTTGAGAGATGAGGTGCGGATATTGAAAGAGCTGCCAACCAGACTCAAGCGAAAAGTGGAAAATGGATTTCTTTACACCATGCCCCCGATTAGTTGGTCTGACATGTCATACTATAAGAATCAGATTCTGCCATTGATACAAAAGTATAAAGTTGTCCATTTAAATCGAACGGATGCTCGGTTGGCAAATAATGGACAATCTTTAGAGATTCAGAAGCTGCGTTGCCGAGTCAATTTTAGTGCTCTTAGATTTACTCCTCAGATTGAGGAGTTAGGCAGAAAGGTGATCAATCTTCTGAAACAGAATGGCCCATTTCTGGTACTTCACCTGAGGTATGAGATGGACATGTTGGCATTTTCTGGCTGTACTCAAGGTTGCAACAGTGACGAGGTAGAAGAATTGACAAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCCGATTTGAAAAGAAAAGATGGTTTATGTCCTCTAACACCCGAAGAGACTGCTCTTGCGCTTAGGGCCTTTGACATTGATCAAAACATTCAAATCTACATTGCTGCTGGGGAAATATATGGTGGGAGTAGGAGAATGGCCAGTCTAGCAAAGAACTATCCAAAATTGGTCAGAAAGGAAACACTGTTGGAACCGTCTGAACTCCAGTTCTTCCAAAACCATTCCTCTCAAATGGCAGCATTGGATTATCTTGTTTCATTAGAGAGTGATATCTTTGTTCCTACATATGATGGAAATATGGCCAAAGTAGTTGAAGGTCATCGCAGATATCTTGGGTTCAAGAAGACAATTTTATTGAACAGAAAGCTCTTAGTTGAGTTGATAGATCAATACAACAATGGAGCAATGAGCTGGGATGAATTCTCTTCTGCCGTGAAGCAATCTCATGCAGATCGCATGGGCGGCGCAACGAAAAGATTGGTAATACCTGATCGACCAAAAGAAGAGGATTTTTTCTATGCCAATCCAGAGGAATGTTTAGAACCATCAGAAGACGACACATCGAGAAGTACATCGAGTTAA 1551 0.4139 MKEPLLWGREDKSRSKRGKVIWEGLMMMSKNKVEKLKNTVTVRSSRMNLWMIRATTSVILWICIVQLTAFGDMWGPRVLKGWPSCFTQESAIVEFPTALPRVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFQDIFDLDHFITSLRDEVRILKELPTRLKRKVENGFLYTMPPISWSDMSYYKNQILPLIQKYKVVHLNRTDARLANNGQSLEIQKLRCRVNFSALRFTPQIEELGRKVINLLKQNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALALRAFDIDQNIQIYIAAGEIYGGSRRMASLAKNYPKLVRKETLLEPSELQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVELIDQYNNGAMSWDEFSSAVKQSHADRMGGATKRLVIPDRPKEEDFFYANPEECLEPSEDDTSRSTSS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2832 516 PIRSF UCP009360 10 500 IPR024709 -
Psa1g2832 516 Pfam GDP-fucose protein O-fucosyltransferase 114 434 IPR019378 -
Psa1g2832 516 CDD O-FucT_plant 114 439 IPR024709 -
Psa1g2832 516 PANTHER OS02G0726500 PROTEIN-RELATED 23 508 - -
Psa1g2832 516 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 23 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2832 Psa-Chr1 245864098 245868073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2832 110 516 Miscellaneous Gene Families AT2G37980 47.754 3.00e-131 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2832 K23280 - gmx:100778901 892.878