Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2793 ATGGAAGCAAAGAAAGTCTGTGAAGTGTTACTAAATTCGGAGAAAAATATGCCAATGATAGGCCTAGGAACTGCAACAGCTCCTCTTCCTACAAATGAAGCTCTCACCTCAATTTTGCTTGATGCCATTGAAATTGGTTACAGACATTTTGATACGGCCTCTATCTATGGTACTGAAGAACCTCTAGGCGAAGCTGTTTCAAAAGCTTTAGAACTCGGCCTTATAAAAACTCGCGACGAAGTGTTCATTACTTCCAAGTTATGGTGCACCGATGCTCACCCTGACCTTGTTCTCAAGGCTCTCCAGACCACTCTCAAAAAGCTGAAGATGGAGTATGTAGATCTCTACTTGATTCACTGGCCAGTGAGGTTGAAACCAGACATTGAAGGCTTTAACTTTACAGGAAAGGATGTGATTCCCTTTGAAATTAAAGGAACATGGAAAGCTATGGAAGATTGTTATAGATTAGGCTTGGCCAAGTCTATTGGTGTTAGCAACTTTGGCATCAAAACGCTGTCCCTACTCTTGGAAAATGCTACCATCTCTCCTGCAGTTAATCAGGTAGAAATGAATCCATCATGGCAACAAGGAAAACTCAGGGAATTCTGCATGAAGAAAGGAATTCATGTGTGTGCATGGTCACCACTAGGAGCATACAAAGTATTTTGGGGTTCAAATGCTGTGATGGAGAATCCAATTCTTCAGAAAATTGCTGAGGCTAGAAATAAGAGTGTACCTCAGATAGTACTAAGATGGATTCACGAGCAAGGAACAAGTGTAATTGTGAAAAGCTTCAACAAGGAGAGAATGAAACAAAACCTTGAAATATTTGATTGGGAACTGAACCAAGAGGAAGTGGACAAAATCAATAAGATTCCACAATGCAGACTTTACAAGGCAGAAATGTTTGTATCTGAAAATGGACCCTACAGATCCTTGGAAGAGTTGTGGGATGGTGACCCTTGA 966 0.4089 MEAKKVCEVLLNSEKNMPMIGLGTATAPLPTNEALTSILLDAIEIGYRHFDTASIYGTEEPLGEAVSKALELGLIKTRDEVFITSKLWCTDAHPDLVLKALQTTLKKLKMEYVDLYLIHWPVRLKPDIEGFNFTGKDVIPFEIKGTWKAMEDCYRLGLAKSIGVSNFGIKTLSLLLENATISPAVNQVEMNPSWQQGKLREFCMKKGIHVCAWSPLGAYKVFWGSNAVMENPILQKIAEARNKSVPQIVLRWIHEQGTSVIVKSFNKERMKQNLEIFDWELNQEEVDKINKIPQCRLYKAEMFVSENGPYRSLEELWDGDP* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2793 321 SUPERFAMILY NAD(P)-linked oxidoreductase 9 294 IPR036812 -
Psa1g2793 321 CDD AKR_AKR4A_4B 17 294 IPR044497 GO:0016616
Psa1g2793 321 PIRSF AKR 2 315 IPR020471 GO:0016491
Psa1g2793 321 PANTHER ALDO/KETO REDUCTASE 7 320 - -
Psa1g2793 321 ProSitePatterns Aldo/keto reductase family signature 1. 46 63 IPR018170 GO:0016491
Psa1g2793 321 Gene3D - 7 320 IPR036812 -
Psa1g2793 321 ProSitePatterns Aldo/keto reductase family putative active site signature. 261 276 IPR018170 GO:0016491
Psa1g2793 321 Pfam Aldo/keto reductase family 20 292 IPR023210 -
Psa1g2793 321 PRINTS Aldo-keto reductase signature 42 66 IPR020471 GO:0016491
Psa1g2793 321 PRINTS Aldo-keto reductase signature 103 121 IPR020471 GO:0016491
Psa1g2793 321 PRINTS Aldo-keto reductase signature 150 167 IPR020471 GO:0016491
Psa1g2793 321 PRINTS Aldo-keto reductase signature 184 213 IPR020471 GO:0016491
Psa1g2793 321 PRINTS Aldo-keto reductase signature 228 252 IPR020471 GO:0016491
Psa1g2793 321 ProSitePatterns Aldo/keto reductase family signature 2. 150 167 IPR018170 GO:0016491
Psa1g2793 321 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 7 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2793 Psa-Chr1 241170740 241172047 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2793 K22374 K19651 gmx:100787305 468.388