Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2790 ATGGAATCAAAATCAATTCCAAAAGTTCTTCTGAATTCAGGTCACAAAATGCCAATGCTAGGGTTTGGTACTGGAACTGTACCCTTACCACCATCTTATGAACTCATTCCAGCATTCATCAATGCCATCAAAGTTGGTTATAGGCATTTTGACACTGCAGCTTATTATGGTTCAGAAGAATCTCTTGGTCAAGCCATAACACAAGCATTGGAACAAGGTCTTATCAAAAGCCGTAACGAACTTTTTGTCACTACTAAACTATGGTGCACTGACTCTCACCCTGGCCTTGTTCTCTCTGCACTCGAAAATTCACTCAAGAGGTTGGACCTAGAATATGTGGATCTATATCTAATACATTTTCCGGTAAGGTTAAGACAAGGTGTTAAAGGGATTAACTACAACAATGGAGACATCCTTCCTTTTGACATGAAAGGAACATGGGAAGATATGGAAAAGTGTGTTAATTTGGGTTTGACTAAGTCTATTGGTCTCAGTAACTTTGGTATCAAAAGAATTTCTGAAATTCTACAATATGCAACAATTCCTCCTGCTCTTGTCACGGTGGAAATGAATGCAGCATGGACACAAGAAAATCTAAGAAATTTCTGCAAAGAGAAAGGAATTCACGTGAGTGCATGGTCACCTTTAGGAGCTAATGGAGCTGTATGGGGTTCACTTGCTGTTATGGAGAGTCCAATACTCAAAGAAATTGCAACTTCATTAGGAAAATCTGTGGCACAAGTTGCATTGAGATGGGTGATAGAGCAAGGTTCGACTCCAATTGTGAAGAGCTTCAACAAGGAAAGAATGAAAGGAAATCTTGAAATATTTGATTGGAAGCTAAGTAAGTATGATTTGGAGAAGATCAAGAAAATACCACAGTATAGGGCTTTTAAAGGAGAACGTTTTATCTCAGAAAATGGACCTTACAAAACTGCTGAAGATCTTTGGGGTTGA 957 0.3866 MESKSIPKVLLNSGHKMPMLGFGTGTVPLPPSYELIPAFINAIKVGYRHFDTAAYYGSEESLGQAITQALEQGLIKSRNELFVTTKLWCTDSHPGLVLSALENSLKRLDLEYVDLYLIHFPVRLRQGVKGINYNNGDILPFDMKGTWEDMEKCVNLGLTKSIGLSNFGIKRISEILQYATIPPALVTVEMNAAWTQENLRNFCKEKGIHVSAWSPLGANGAVWGSLAVMESPILKEIATSLGKSVAQVALRWVIEQGSTPIVKSFNKERMKGNLEIFDWKLSKYDLEKIKKIPQYRAFKGERFISENGPYKTAEDLWG* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2790 318 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 7 317 - -
Psa1g2790 318 Pfam Aldo/keto reductase family 20 292 IPR023210 -
Psa1g2790 318 ProSitePatterns Aldo/keto reductase family signature 1. 46 63 IPR018170 GO:0016491
Psa1g2790 318 PANTHER ALDO/KETO REDUCTASE 7 317 - -
Psa1g2790 318 ProSitePatterns Aldo/keto reductase family putative active site signature. 261 276 IPR018170 GO:0016491
Psa1g2790 318 PRINTS Aldo-keto reductase signature 42 66 IPR020471 GO:0016491
Psa1g2790 318 PRINTS Aldo-keto reductase signature 103 121 IPR020471 GO:0016491
Psa1g2790 318 PRINTS Aldo-keto reductase signature 150 167 IPR020471 GO:0016491
Psa1g2790 318 PRINTS Aldo-keto reductase signature 184 213 IPR020471 GO:0016491
Psa1g2790 318 PRINTS Aldo-keto reductase signature 228 252 IPR020471 GO:0016491
Psa1g2790 318 ProSitePatterns Aldo/keto reductase family signature 2. 150 167 IPR018170 GO:0016491
Psa1g2790 318 SUPERFAMILY NAD(P)-linked oxidoreductase 8 302 IPR036812 -
Psa1g2790 318 CDD AKR_AKR4A_4B 13 294 IPR044497 GO:0016616
Psa1g2790 318 PIRSF AKR 2 316 IPR020471 GO:0016491
Psa1g2790 318 Gene3D - 6 318 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2790 Psa-Chr1 241042798 241044284 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2790 K22374 K19651 gmx:100799650 522.316