Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2295 ATGGCACCTAATCGCGTTTATGAAGCATGGAAAGGAAGTAATAAATTCCTGTTTGGAGGACGGTTGATATTTGGGCCTGACGCTAAGTCATTGCTTATCAGTTTGGTGCTGGTCATAGTTCCAGTTATCATCTTTTGCATATTTGTAGCAAGACATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTGGTGGTAGCAGTTATCTTCAATATTTATGTGTTGATACTTCTCTTTCTTACTTCTGCACGCGATCCGGGCATTATTCCAAGGAATTTACATCCGCCTGAGGAAGATTTCCGTTATGACTCGTCCGTTTCTATTGACATCGGGGGGCGGCAAACACCAAGCCTTCAGTTCCCCCGAACAAAGGAGGTAATGGTCAATGGCCTTCCTGTAAGGGTGAAGTATTGCGATACCTGTATGCTGTATCGTCCTCCTCGTTGCTCACATTGTTCCATCTGCAACAATTGTGTTCAACGTTTTGATCATCACTGCCCTTGGGTTGGACAATGCATTGGACTGAGGAACTATCGTTACTTCTTTATGTTTGTTTCTTCGGCAACTCTTCTATGCATCTATGTGTTTTCAATCTCAGCTTTTTACATCAAGGTTCTGATGGATCATAATCATGGGACAGTGTGGAAGGCAATGAAAGAATCCCCTGCATCTGTTATATTAATGGCATATTGTTTCATTGCTCTGTGGTTTGTTGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGTACAAACCAGACCACCTATGAAAACTTCCGATACAGAGCAGATAGCAGGATCAACGTTTACAATCAGGGCTGTATAAATAACTTTCGCGAAGTCTTTTGTACAAAAGTGCCGCCTTCAAAAAACAACTTTCGAGCTCTTGTTCAAGAAGAGGTACAGAGGCAACCTCCTCAAGTCGTTACCCAGGAACCAGAATCAGATACGGGAGGAGATCATCGTTCTAAGGTTGAAGATGATCTAGACATCGGTGAAGACCTATTGAAGATATCACAGCGCCGGAATATTGAAGGTTTTGATGAAGAAATTCGGAGTAGAGGGAGCAATGGACCTTACCATACTTCTGAAGGTGATTCAGTTTTGGGCTCAGATCGTCGAGCTCCAACAGTTCGATCGGACGAAAGGCACTCAAGCCGGAGAAGAAGCGAAAGCTGGGAAATTGAGCCAGATGTACTTGCCAATTCAAATGTAACTGAAACTAGAAGCTATGTTTCTTCGCGACAATGA 1260 0.427 MAPNRVYEAWKGSNKFLFGGRLIFGPDAKSLLISLVLVIVPVIIFCIFVARHLRHEFSSYNAGYAILVVAVIFNIYVLILLFLTSARDPGIIPRNLHPPEEDFRYDSSVSIDIGGRQTPSLQFPRTKEVMVNGLPVRVKYCDTCMLYRPPRCSHCSICNNCVQRFDHHCPWVGQCIGLRNYRYFFMFVSSATLLCIYVFSISAFYIKVLMDHNHGTVWKAMKESPASVILMAYCFIALWFVGGLTGFHLYLIGTNQTTYENFRYRADSRINVYNQGCINNFREVFCTKVPPSKNNFRALVQEEVQRQPPQVVTQEPESDTGGDHRSKVEDDLDIGEDLLKISQRRNIEGFDEEIRSRGSNGPYHTSEGDSVLGSDRRAPTVRSDERHSSRRRSESWEIEPDVLANSNVTETRSYVSSRQ* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2295 419 MobiDBLite consensus disorder prediction 303 329 - -
Psa1g2295 419 PANTHER S-ACYLTRANSFERASE 6 419 - -
Psa1g2295 419 MobiDBLite consensus disorder prediction 303 317 - -
Psa1g2295 419 Pfam DHHC palmitoyltransferase 139 263 IPR001594 GO:0016409
Psa1g2295 419 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 6 419 - -
Psa1g2295 419 ProSiteProfiles DHHC domain profile. 139 189 - -
Psa1g2295 419 MobiDBLite consensus disorder prediction 400 419 - -
Psa1g2295 419 MobiDBLite consensus disorder prediction 350 419 - -
Psa1g2295 419 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2295 Psa-Chr1 178704762 178713950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2295 65 320 Lipid Metabolism Gene Families AT4G22750 25.564 2.39e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2295 K16675 - gmx:100795934 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g2295 1 178704762 178713950 Psa6g4365 6 383456477 383459761 PCT