Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0905 ATGAAAAAAAATAACCCCATGATGCAACGTTTGGTTGATCATGTCCTCGTCGTCACTAAAGAGTCAGTGAAAGCTGTTACTTGTGAGTCATTGAACAATATTGTTAGGATAATCAATGGAATATCTGCACTTTTGTTGGCATTACTTCCTGGAAATGCGAAAATACTCGAAGGTATTCATGGTTGGGAACTCAGACCGACTTTTCGAGGACCGCGGTTTCCGCGTTGGATGGAGAATGGCGCGTCGTCTTTCAACCAATTCATCCACGAACTTTCTATGGATTCCGATAACTCAAGCCTCGAGTACTCATCATCGGGAGAAGAAGATATTGATAGATATGAATGCCCTCCGTCTCCGGCATCTCATAGTTCTAGAGCTTCTGAAGCTGCTTTTGCTAGAAACAGTAGGCATCAGATGAACTGGATCCAATATATCTTACTTTGGATTTTACTTCCTGTAAAATTCTTGATGAGGATTCCGCTGCGTCTTCTCCATTTAGCTTATTTTGTGGTGTTAAAAGTACTACATATCTCTAGAGAGAAACGCCCTTCACATTTACATGCATATAGGAGAGTGCAAAGCATCAAGGATCAATTTATCCACCGTGCTACTGATAGGAGACGCGGCATTGTAGAGGATCTTCATCTCGGCATAGAGATATGTATAGAAACTGTCTTTGATGTTGTTCGTAAAGGAGCACATCTTCTTCTATCTCCAACAAAAGCTTTTGGTGCATTATTCAGGTTGTTTTGGTCTCACGAAAGTGGCAATGAAGAATTTCGCTATTCTGCTGAGGATGCATCGACTTCTACATCCACGCTGGGGGACGGAGACCCTGCATCTTCTGAGAGGAAAATCAACTACCAGTCTTTGAATACAGAAGCGCGGACATGTCAGGATGTCATAACAGATCTCGGGTATCCGTACGAAGCTATTCACGTAATTACTGCTGACGGATATATTCTTCTTTTGGAAAGAATACCCAGGCGAGATGCTAAAAAAGCTGTTTTTCTTCAGCATGGTGTTTTTGATTCATCAATGGGTTGGGTATCGAATGGTGTTGTTGGTTCTCCAGCTTTTGCGGCGTATGATCAAGGGTATGATGTATTTCTTGGGAATTTTCGCGGATTGGTTTCCAGAGAACATGTCAACAAGAACATATCATCGCGTCAATATTGGCAGTACTCTGTCAACGAGCATGCGACCGAGGATATTCCTGCTATGATAGAGAAAATCGATGAAGTGAAAACTGCTGAATTAAAGCTTAGTAAACCTGATATCGAGGAGGAAACCGATGACGATCAGCTTTACAAGCTTTGTGCAATTTCTCATAGTTTAGGAGGAGCTGCTATGATAATAGATTCTATTAACTATTGCGGCTCCCGTTTTGTCTCATGTTGTGCCTGCGTTTTATATACCTACGCGATTTTTTCGCATGCTTGTGTTTAA 1449 0.4175 MKKNNPMMQRLVDHVLVVTKESVKAVTCESLNNIVRIINGISALLLALLPGNAKILEGIHGWELRPTFRGPRFPRWMENGASSFNQFIHELSMDSDNSSLEYSSSGEEDIDRYECPPSPASHSSRASEAAFARNSRHQMNWIQYILLWILLPVKFLMRIPLRLLHLAYFVVLKVLHISREKRPSHLHAYRRVQSIKDQFIHRATDRRRGIVEDLHLGIEICIETVFDVVRKGAHLLLSPTKAFGALFRLFWSHESGNEEFRYSAEDASTSTSTLGDGDPASSERKINYQSLNTEARTCQDVITDLGYPYEAIHVITADGYILLLERIPRRDAKKAVFLQHGVFDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRQYWQYSVNEHATEDIPAMIEKIDEVKTAELKLSKPDIEEETDDDQLYKLCAISHSLGGAAMIIDSINYCGSRFVSCCACVLYTYAIFSHACV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0905 482 Gene3D alpha/beta hydrolase 286 467 IPR029058 -
Psa1g0905 482 SUPERFAMILY alpha/beta-Hydrolases 296 450 IPR029058 -
Psa1g0905 482 Pfam Partial alpha/beta-hydrolase lipase region 299 353 IPR006693 GO:0006629
Psa1g0905 482 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 15 454 - -
Psa1g0905 482 MobiDBLite consensus disorder prediction 264 283 - -
Psa1g0905 482 PANTHER LYSOSOMAL ACID LIPASE-RELATED 15 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0905 Psa-Chr1 60634061 60638343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0905 8 453 Lipid Metabolism Gene Families AT1G18460 59.333 1.94e-175 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0905 - - gmx:100785917 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0905 1 60634061 60638343 Psa1g0905 1 60634061 60638343 ECH