Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0904 ATGGTAACGACAAGACAACATTACTTTATCATTAAAAACTATAGGTGTGACCTTGTGCTATTATTATTGCCAAGTGCCACTGCTACAGCACAGATAGGAAAACTCAAAACCATGAAAGCTATGAAAGCTTCATTGCACATCACTACTCCATTTGCTCTCATTTCACCCAACCAACTACTCAATGCAATCACTCTTGGGGATAAGTATTTTGGTTTCAAATATAGCAAAGATAAGAGTATTGTGATGACAATGGTAGCCACAGGATTAGGTAAAGGTGGTGGTTTGTTGGAGAAGCCTCCAACCATAGAGACAACATCACCTGGTCGAGAATCTGAATTTGATTTAAGGAAATCAAGAAAAACATCCCCACCATACAGAGTAATGCTACACAATGACAACTACAATAAAAGAGAATATGTAGTACAAGTGTTGATGAAAGTGATACCTGGAATGACAGTTGATATTGCGGTTAACATCATGCAAGAGGCGCATTATAATGGATTAGCAGTGGTCATTATCTGTGCTCAAGTTGATGCTGAAGATCATTGCCTGCAATTGAGAGGAAATGGCCTTTTAAGTTCAATTGAGCCAGCAGATGGTGGTTGTTGA 609 0.3875 MVTTRQHYFIIKNYRCDLVLLLLPSATATAQIGKLKTMKAMKASLHITTPFALISPNQLLNAITLGDKYFGFKYSKDKSIVMTMVATGLGKGGGLLEKPPTIETTSPGRESEFDLRKSRKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGLAVVIICAQVDAEDHCLQLRGNGLLSSIEPADGGC* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0904 202 SUPERFAMILY ClpS-like 119 196 IPR014719 -
Psa1g0904 202 Pfam ATP-dependent Clp protease adaptor protein ClpS 120 188 IPR003769 GO:0030163
Psa1g0904 202 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 41 202 IPR022935 GO:0006508
Psa1g0904 202 Gene3D - 119 197 IPR014719 -
Psa1g0904 202 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 41 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0904 Psa-Chr1 60561471 60563794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0904 K06891 - gmx:100785379 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0904 1 60561471 60563794 Psa1g0904 1 60561471 60563794 ECH