Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0903 ATGGCTTTTTCAAAATCACTTCTATCCTTCACCTTCACCATATCACTTTTCATCACTACTATCTCTCTTTTCTCATTTCCAACTTCCTCTCGCATCACTCCTTCTCACACTTCTCTTCTTGATGTCTCTTCCTCAATTCACCAAACCAAACAAGTCCTTAACTTTAACCCTAATAAAAATCTTCTAGAATCATCTAATAATCAAGAAAAAATCACCCAACACAAACCCTTTTCAAATTCTTCAAACTCCTTCTCCATTCTCATACACCCAAGAGAAACCCTTTTGAATGAACATCACAAAGACTACAAAAAACTAGTCTTGGCACGACTCGCTCGTGACTCAGCCCGAGTCAACTCACTCACAACAAAACTCAAACTTTCCCTCAACAACATCAAAAAATCGGATCTTCACCCGACCCAAGTAGAGCTCCAACAAGAAGATCTCTCAACTCCAGTTTCCTCCGGCACGGGTCAAGGCTCTGGCGAGTATTTCACCCGACTCGAAGTGGGTCAACCCGCGAAACCCTACTACATGGTTCTCGACACAGGAAGCGACGTGAACTGGATCCAATGCAAACCATGCTCCGAATGTTACCAACAAACCGACCCGATTTATGACCCGACATCATCTTCAACCTACGAATCATTAACCTGCGAAGCACAACAGTGTCAAAAGCTAGAAGTTTCCGCTTGTCGTAGCGGTAAATGTCTCTATCAAGTTAACTACGGTGACGGTTCTTTCACCGTCGGTGAATACATGACTGAAACGGTGTCGTTTGGTTCTTCCGGGTCGATTAATCGGGTCGCAATCGGGTGCGGGCATGATAACGAAGGTTTATTCGTTGGTGCTGCTGGTTTACTCGGTCTCGGTGGTGGGGCCCTCTCGTTAACTTCGCAGATCAAAGCGTCGTCGTTTTCGTACTGTTTAGTAGATCGTAACTCGGATAAATCGTCAACACTGGAGTTCAACTCACTAAAACCCGCTGACTCAGTAACAGCACCGTTGTTAAGAAATCAAAAACTCGACACTTTCTACTACGTTCAGATCACCGGAATGAGCGTCGGAGGTCAGATGGTATCTGTCCCACCCGAGATTTTCTCGGTGGATCAAACCGGTAGTGGAGGAATCATCGTTGACTCGGGAACTGCCATCACTCGGTTGCAGACTCAAGCTTATAACTCAGTTCGCGACGAGTTTAAAAGATTGACTCAGAATCTGCGTTTAACCGACGGTATTGCGCTTTTCGATACTTGCTACGATTTGTCGAACTTACAAAGCGTGCGTGTTCCAACGGTGTCGTTTCATTTCGGCGGTGATAAAGTTTGGGATTTACCGGCGAAGAATTACTTGATTCCGGTAGACTCCTCCGGAATTTTCTGTTTTGCTTTTGCTCCGACATCGTCGGCGTTGTCAATTATTGGGAATGTTCAACAACAAGGGACACGTGTCAGCTTTGATCTTGCAAATAATTTAGTGGGATTTTCTCCTAATAAGTGCTAA 1500 0.448 MAFSKSLLSFTFTISLFITTISLFSFPTSSRITPSHTSLLDVSSSIHQTKQVLNFNPNKNLLESSNNQEKITQHKPFSNSSNSFSILIHPRETLLNEHHKDYKKLVLARLARDSARVNSLTTKLKLSLNNIKKSDLHPTQVELQQEDLSTPVSSGTGQGSGEYFTRLEVGQPAKPYYMVLDTGSDVNWIQCKPCSECYQQTDPIYDPTSSSTYESLTCEAQQCQKLEVSACRSGKCLYQVNYGDGSFTVGEYMTETVSFGSSGSINRVAIGCGHDNEGLFVGAAGLLGLGGGALSLTSQIKASSFSYCLVDRNSDKSSTLEFNSLKPADSVTAPLLRNQKLDTFYYVQITGMSVGGQMVSVPPEIFSVDQTGSGGIIVDSGTAITRLQTQAYNSVRDEFKRLTQNLRLTDGIALFDTCYDLSNLQSVRVPTVSFHFGGDKVWDLPAKNYLIPVDSSGIFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNLVGFSPNKC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0903 499 Gene3D Acid Proteases 137 320 IPR021109 -
Psa1g0903 499 SUPERFAMILY Acid proteases 158 499 IPR021109 -
Psa1g0903 499 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 376 387 IPR001969 GO:0004190|GO:0006508
Psa1g0903 499 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 23 499 - -
Psa1g0903 499 PANTHER ASPARTYL PROTEASES 23 499 IPR001461 GO:0004190|GO:0006508
Psa1g0903 499 Pfam Xylanase inhibitor N-terminal 163 322 IPR032861 -
Psa1g0903 499 Gene3D Acid Proteases 321 499 IPR021109 -
Psa1g0903 499 Pfam Xylanase inhibitor C-terminal 345 495 IPR032799 -
Psa1g0903 499 ProSiteProfiles Peptidase family A1 domain profile. 163 495 IPR033121 -
Psa1g0903 499 CDD cnd41_like 162 499 IPR033873 -
Psa1g0903 499 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 178 189 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0903 Psa-Chr1 60462771 60465186 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0903 140 499 Miscellaneous Gene Families AT1G77480 26.566 1.09e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0903 K22683 - gmx:100784849 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0903 1 60462771 60465186 Psa1g0903 1 60462771 60465186 ECH