Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0898 ATGGCTATGGTGGATCAACCTCTGTATCCGATTGCTGTTCTAATCGATGAGTTGAAGAACGAGGATATTCAACTGAGGCTGAACTCGATCCGTAGGCTTTCAACGATTGCGCGTGCGTTGGGTGAGGAGAGGACAAGGAAAGAGCTGATTCCTTTCCTTAGCGAGAATAACGACGATGATGATGAGGTGCTTCTTGCAACGGCTGAGGAATTGGGGGTTTTCGTTCCTTATGTTGGTGGTGTGGAGCATGCTAGCGTTTTGCTTCCGCCTTTGGAAACTCTTTGTACCGTTGAGGAAACTTGTGTTAGGGATAAGTCAGTTGAGTCCCTTTGTAGAATTGGTTCTCAGATGAGGGAACAAGATTTGGTTGAACACTTCATTCCTTTAGTTAAGAGGCTGGCTTCTGGTGAGTGGTTCACTGCCCGAGTTTCTTCATGTGGCTTGTTTCATATTGCCTACCCTAGTGCACCAGATGCATTGAAGACTGAACTAAGAGCCATATATGGGCAGTTGTGTCAAGATGATATTGCACCAGATGCATTGAAGACTGAACTAAGAGCCATATATGGGCAGTTGTGTCAAGATGATATGCCTATGGTTAGGAGATCTGCTGCTACCAACCTGGGAAAATTTGCTGCTACCGTTGAAGCTGCTCACTTGAAAACTGACATCATGTCTGTGTTCGATGATCTCACACAGGATGATCAAGATTCTGTTCGGCTTCTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGATTGTGTGGCACATATTCTTCCTGTTATAGTCAATTTTTCTCAGGATAAGTCATGGCGCGTTCGTTACATGGTTGCCAATCAACTCTATGAGCTCTGTGAAGCTGTTGGTCCTGATTCCACCAAGACGGAATTGGTTCCTGCATATGTTCGGCTGCTGCGTGATAATGAGGCAGAAGTACGTATTGCTGCTGCTGGGAAAGTGACCAAGTTCTCCCGCATATTAAGTCCTGAACTAGCCATTCAGCATATTCTACCATGTGTAAAGGAGTTATCAACAGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCGGTTATAATGGGAATGGCACCGGTCTTAGGGAAGGATGCAACAATTGAGCAACTTCTCCCTATTTTCCTCTCTCTTTTGAAAGACGAGTTTCCTGATGTCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTATTGGTATTGATCTCTTATCTCAGTCGCTTTTACCAGCTATCGTTGAGCTTGCTGAGGATCGGCACTGGAGAGTTAGACTTGCAATCATAGAATATATACCATTGTTAGCAAGTCAGTTGGGTGTAGGCTTTTTTGATGATAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTATACTCAATCCGTGATGCAGCTGCCAATAATGTCAAACGCTTAGCAGAAGAATTTGGACCAGAGTGGGCAATGCAGCATATTATTCCCCAAGTTTTGGACATGATTAATGATCCACATTACCTGTATCGGATGACAATTCTACACGCAATTTCTCTGTTAGCTCCTGTTCTGGGCTCAGAAATTACTTCCACAAACCTGCTTCCTCTAGTCGTTAATGCATCAAAGGATCGGGTACCCAATATCAAATTCAATGTTGCTAAAGTATTGCAGTCTCTAATTCCAATTGTTGATGAATCTGTTGTGGAGAGTACCATCCGTCCATGTCTTGTTGAGCTTAGCGAGGATCCGGATGTTGATGTGAGGTTTTTTGCTTCTCAAGCACTACAATCTAGTGATCAAGTGAAGATGTCCAGCTAG 1827 0.4395 MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLATAEELGVFVPYVGGVEHASVLLPPLETLCTVEETCVRDKSVESLCRIGSQMREQDLVEHFIPLVKRLASGEWFTARVSSCGLFHIAYPSAPDALKTELRAIYGQLCQDDIAPDALKTELRAIYGQLCQDDMPMVRRSAATNLGKFAATVEAAHLKTDIMSVFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDSTKTELVPAYVRLLRDNEAEVRIAAAGKVTKFSRILSPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPEWAMQHIIPQVLDMINDPHYLYRMTILHAISLLAPVLGSEITSTNLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVDESVVESTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 575 608 IPR021133 -
Psa1g0898 608 Gene3D - 2 600 IPR011989 -
Psa1g0898 608 SUPERFAMILY ARM repeat 8 600 IPR016024 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 380 418 IPR021133 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 497 535 IPR021133 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 341 379 IPR021133 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 419 457 IPR021133 -
Psa1g0898 608 Pfam HEAT repeat 263 291 IPR000357 GO:0005515
Psa1g0898 608 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 177 608 - -
Psa1g0898 608 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 1 176 - -
Psa1g0898 608 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 1 176 - -
Psa1g0898 608 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 177 608 - -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 302 340 IPR021133 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 185 223 IPR021133 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 536 574 IPR021133 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 224 262 IPR021133 -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Psa1g0898 608 Pfam HEAT repeats 382 480 - -
Psa1g0898 608 ProSiteProfiles HEAT repeat profile. 263 301 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0898 Psa-Chr1 60096082 60102987 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0898 K03456 - gmx:100799440 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0898 1 60096082 60102987 Psa1g0898 1 60096082 60102987 ECH