Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0879 ATGGCTTCTCTTACTCATTGCAATCTAATTCTATTCTTCCACATCTTTCTCTTGTTCATAATTTCCTATCCCCCAAACACTCTTTCACAGGATCCAACCTCCTCAAGCCCAACAATAGCTCCATGCACATCAAACCTCCTTCCTCTCATTCCTTGCACACCATTCGCGCAGGGTGCGGTTAGCGCTCCGGCGTCCGATTGTTGTAGCAACCTCAAGCAACTGTATGGCCAAGAGCCACATTGTATTTGCCTCTTGCTCAATAACACTGCATTTACCTCTTTCCCTATAAACAAAACACTTGCTATTCAGATTCCATCTCTTTGTAACCTCCAAGTCAATAACTCAGTTTGTCCAGGGGAGAAAACACATGCGCCTCCTCCATCTTCGTCAAGTTCTCAAGTTTCCTTTGGGACAAAGAACAACTCTACTGTTGCTGCTTCTCCGGCATTTTCAGTGCCACCAAGACCTAGCATGATGGGATTTGGGTTTGGAAGAAGTGAAGCCATTAACTTGAAGGCAAAGAATGGGATCATTGTTATCATGAACATAACAATTTTCATGTTCATATTAATGCCTTAA 579 0.4318 MASLTHCNLILFFHIFLLFIISYPPNTLSQDPTSSSPTIAPCTSNLLPLIPCTPFAQGAVSAPASDCCSNLKQLYGQEPHCICLLLNNTAFTSFPINKTLAIQIPSLCNLQVNNSVCPGEKTHAPPPSSSSSQVSFGTKNNSTVAASPAFSVPPRPSMMGFGFGRSEAINLKAKNGIIVIMNITIFMFILMP* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0879 192 Pfam Probable lipid transfer 33 117 IPR016140 -
Psa1g0879 192 PANTHER BNAC05G14110D PROTEIN 14 185 - -
Psa1g0879 192 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 41 119 IPR036312 -
Psa1g0879 192 Gene3D - 38 115 IPR036312 -
Psa1g0879 192 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 14 185 IPR043325 -
Psa1g0879 192 CDD AAI_LTSS 49 110 - -
Psa1g0879 192 SMART aai_6 42 117 IPR016140 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0879 40 164 Acyl Lipid Metabolism Gene Families AT1G73890 51.449 5.60e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0879 - - mtr:MTR_6g084630 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0879 1 58560046 58561029 Psa1g0879 1 58560046 58561029 ECH