Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0868 ATGGTACGTCGCAAACGGGAAAGTCTTCCACCGGCGATTTCAAGAGATGATTATCCTTCAAAGCGTAGAAGACATTCTATGTTCGAAATTTCGGCCTCTAATCACGGAGTATCTTCTTCTTCTAGAAAATGGGTTTTCTCCTCCGAAAATTGTTCTGATTGCACGGATACGATTGTAGTTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAATCATATGGATTTGTATTCCAATATTCCACGACGTTTCTTGGAGTGGGGAAGACGCAAGAGGCTTATACTTGACGAGATTAACGGCTATAATGCAAGTATACTCTGTTTTCAGGAGGTTGATCATTTTGACGATTTAGATGATCTTTTTCAGAACAATGGCTTCAAAAGTTCTTACAAGGCTCGCACAGGAGAAGCAAACGATGGATGTGCTATATTTTGGAAAGACAAATTATTCAGTCTTTTGCATCAAGAAGATATAGAGTTCCAAAAGTTTGGTCTGCGTAACAATGTTGCTCAGCTTTGTGTTTTGGAGGTAAACAATGATAATCCAGAATCTGACACATGTAAACTAACATCAGAGAAACAATCCACCAGAAACAATAGATTTGTAATAGGAAATATACATGTGTTGTTCAACCCTAACCGTGGTGATATCAAACTTGGCCAGGTCAGACTTTTAATTGATAAAGCTTACAAGTTATCACAAGAATGGGGAAACATCCCTGTTATTTTAGCTGGAGATTTAAACAGTGTGCCACAGAGTGCAATATATAAATTTCTGTCTTCATCAAAGTTAGACGTCCAATTACATGATCGCAGAAATATGTCAGGACAGCTCGAAATCCGGCCCAATCACAGATACTTCAGATCAAAGATTGGTGATGATGCTAGCATTTCAATGTCTGTTTCAAGGCAAATGCTATACAAATGGAGTGCGGAAGAACTAATCCTTGCAACTGGCACAAAAGGAGTCACTCAACTTCAGCACCAGCTCAAGCTCCGCAGTGCTTATAGCGGCATTCCTGCTGGAAAGCTTAGAACAAGAGATGATATTGGAGAGCCCTTGGCAACATCATACCACTCTAAGTTCATGGGAACTGTTGATTATATCTGGCATTCCGAGGAACTTATCCCGGTCAGAGTTCTTGAAACCTTGCCCATTGATATTCTTAGAAGAACTAGAGGGCTCCCTAACGAGAATTGGGGAAGTGACCACCTTGCCGTCGTATGTGAATTTGCCTTTGCAAAAAGTGCTGAAAGTTCTGATTCTTGTGATCTTCCCTAG 1284 0.4011 MVRRKRESLPPAISRDDYPSKRRRHSMFEISASNHGVSSSSRKWVFSSENCSDCTDTIVVVSYNILGVENASNHMDLYSNIPRRFLEWGRRKRLILDEINGYNASILCFQEVDHFDDLDDLFQNNGFKSSYKARTGEANDGCAIFWKDKLFSLLHQEDIEFQKFGLRNNVAQLCVLEVNNDNPESDTCKLTSEKQSTRNNRFVIGNIHVLFNPNRGDIKLGQVRLLIDKAYKLSQEWGNIPVILAGDLNSVPQSAIYKFLSSSKLDVQLHDRRNMSGQLEIRPNHRYFRSKIGDDASISMSVSRQMLYKWSAEELILATGTKGVTQLQHQLKLRSAYSGIPAGKLRTRDDIGEPLATSYHSKFMGTVDYIWHSEELIPVRVLETLPIDILRRTRGLPNENWGSDHLAVVCEFAFAKSAESSDSCDLP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0868 427 Pfam Endonuclease/Exonuclease/phosphatase family 61 405 IPR005135 GO:0003824
Psa1g0868 427 Gene3D Endonuclease/exonuclease/phosphatase 32 424 IPR036691 -
Psa1g0868 427 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 29 414 - -
Psa1g0868 427 SUPERFAMILY DNase I-like 57 413 IPR036691 -
Psa1g0868 427 PANTHER PROTEIN ANGEL 29 414 - -
Psa1g0868 427 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0868 Psa-Chr1 57988673 57994836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g0868 34 262 EF-hand Containing Proteins AT5G54130 25.105 3.19e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0868 - - gmx:100777474 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0868 1 57988673 57994836 Psa1g0868 1 57988673 57994836 ECH